Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2550 226 4e-54 seq2473 105 9e-18 >seq2550 Length=338734 Score = 226 bits (250), Expect = 4e-54 Identities = 593/898 (66%), Gaps = 10/898 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || || || || | |||||| |||| || || ||||| ||||| | ||| | | Sbjct 314554 TCAAACTCGTCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTC 314613 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | | || |||||||||||| || | ||| || |||||||||| | ||| Sbjct 314614 CAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAG 314673 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || ||| |||||| ||||| || || |||||| ||||| || | Sbjct 314674 AGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAG 314733 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| |||||||| ||||| || || || || | | | || || ||||| || || || Sbjct 314734 ATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCT 314793 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 ||||| | ||||| || || || ||| |||| | ||||| || ||||| |||||||| Sbjct 314794 TGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAA 314853 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 |||||||| || | |||||| || | || || ||| | | ||||| Sbjct 314854 GAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGACCA 314913 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || || || || |||||| || | || || || || || || Sbjct 314914 ATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCG 314973 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 |||||||| || |||| | | ||||||||| || |||||| | || |||||| Sbjct 314974 ATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCC 315033 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || || || | || || || || |||||||| |||| | || | || ||| || || Sbjct 315034 GCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 315093 Query 70057 TCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 ||||| || || |||||| ||||||||| | || |||||||| | ||| || Sbjct 315094 TCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGT 315153 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 || || || || | ||| || ||| | | ||||| | || || || || Sbjct 315154 TGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTGTCTTG 315213 Query 70177 AACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCC 70236 || |||||||| | ||| ||| || | || || | ||| | || || |||| || Sbjct 315214 AATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGAGTTAAGTTCCTCA 315273 Query 70237 TTATATTTGGTAACTATATCCATAACAGTAG-GTGAGATAAT---CGGAGATCGTTTACC 70292 || ||| |||| || | |||| | | | || || || || || || || Sbjct 315274 GCATGTTTCATAACAAT-TTCATAGGTTTTGTGAGAAATCATGGGCGCAGGACGGTT--- 315329 Query 70293 ATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA-AATAGtttttttG 70351 ||||| || || ||| | | | | || || || || || | ||| | || || | Sbjct 315330 GTTTTTTGGGTTGGTATAATGGTAAAGGTCGTCAATAAC-GGACGAGAATTGCTTCTTCG 315388 Query 70352 TTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 | | || || | || |||| |||||||||||| || ||||| || || |||||||| Sbjct 315389 TCTGTTTATGCAGGTTCGATACGGCTATTCTGGCAGCAAGAATCGCGTAATCAGGATG 315446 Score = 98.7 bits (108), Expect = 1e-15 Identities = 335/519 (65%), Gaps = 5/519 (1%) Strand=Plus/Plus Query 68706 CGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATA 68765 |||||| || | || ||||| || | | |||| | || |||||| || || || Sbjct 313683 CGGATTGACAACCTGGAATTCACCTGCAAGAACTCGTCTAGAGTAAATGTTTGATGTGTA 313742 Query 68766 TGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGC 68825 |||||| | | |||| ||| ||| ||||| ||| || || ||||||||||| || Sbjct 313743 TGGTTCAAAACATTCGTTAAATCCGAGAATCTGACTTGTGCTGGCTGTTGGCATAGGAGC 313802 Query 68826 CACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATC 68885 || | || ||||| | | ||||||| || || | ||| || | |||||| Sbjct 313803 GACAAGCAAGCTATTACGCACACCATGTTTTGCAATATCTGTTTTGAGCAAATCCCAATC 313862 Query 68886 CCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATA 68945 ||||||||||| || || ||||| | ||| ||||| | || || ||| | Sbjct 313863 CCAAAGATCAGTAGGCGTCACGTTCCACATATCATATTGCAAAACGCCCTTAGAAACGGG 313922 Query 68946 TGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAA 69005 || || | ||| || ||||| || || || || ||||| || || || || Sbjct 313923 AGAGCCTTCATAGGTCTCATAGGGACCGTCAACTTTGGCTAGGTCGCAGGACGCGGTCAA 313982 Query 69006 TGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATC 69065 || ||| |||||| |||||||| |||| |||| || | | ||| ||| | ||| Sbjct 313983 AGCGGCGTGATAAATGGTTTCGAATATCTGGATATTCAGCTGCTTTGCCTCTGGGGAATC 314042 Query 69066 GAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGG 69125 ||| || | | ||| || || ||||| || | ||||| || || | |||| || Sbjct 314043 GAACGGCAATCGCAAAGCAAGGAAAGCATCGGCAAGGCCCTGCACACCGACGGCGATTGG 314102 Query 69126 TCTATGTCTCTTATTTGAACTTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAA 69184 | ||| | | || ||||| ||||| || | ||||||| || |||| || | Sbjct 314103 ACGATGAC-GGAAGTTACTCTTTCGGGCTTCAGGGACGGGATAATGGTTGTTATCAATGA 314161 Query 69185 TTTTATTAAGATTTCGGACTACTACTT---TAACCACGT 69220 |||| || | ||| || || | |||| ||||| ||| Sbjct 314162 TTTTGTTCAAATTGCGAACGAGAACTTGTGTAACCTCGT 314200 >seq2473 Length=337605 Score = 105 bits (116), Expect = 9e-18 Identities = 178/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || |||||||| || || ||| ||||| ||||||||||| || | || || | ||| Sbjct 139953 TCGGAATGGATATTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCTGGAATC 139894 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || | | ||||| || | | ||| ||||| || || ||||| ||||| Sbjct 139893 TGAACTTCAGCGCTGAATCTCTCGACAAGATTCTCATTGACGATGCCATCGGAGGCGGCG 139834 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTAT---TCCAG 40090 || || |||| || | || || || ||||||| ||| | || ||||| Sbjct 139833 AAGAAGGCCAGGACGCGAGAGATGAAGTAGCGTTCATCGTCGTTCAGTCGATGGTTCCAG 139774 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 |||| || |||||| || | ||| | ||||||||| ||||| || || || || || ||| Sbjct 139773 TCATGGAGATCTTTGGACAAATCGATTTCTTCAGCAGTCCAGAAGGATGCTTCGGCTTTT 139714 Query 40151 TTGTACATGTTCCATAT 40167 |||||||| | ||| || Sbjct 139713 TTGTACATTTGCCAAAT 139697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686882396943000