Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_027299.1 Length=42092 Score E Sequences producing significant alignments: (Bits) Value seq3045 125 2e-24 >seq3045 Length=39278 Score = 125 bits (138), Expect = 2e-24 Identities = 324/476 (68%), Gaps = 32/476 (7%) Strand=Plus/Plus Query 25197 GACAAATGCCGTCTCTTGCGACTTGCCTTGCGGCTGCTCATAGGCAACAGCCACCAGCCC 25256 ||||||| || ||| ||| |||||| | ||| ||| ||||||||| || |||||| Sbjct 36768 GACAAATCGAGTTTCT-GCG-CTTGCC--GGGGCGCCTCGTAGGCAACACACATCAGCCC 36823 Query 25257 GAAGGCGTCAGCGCCGTGACTTGACCAGTCATGGCTTGGCCCTAAGCCGATGCCGCGTTC 25316 ||||||||| |||||||| | ||| || || ||||||| || |||||||| || Sbjct 36824 GAAGGCGTCGGCGCCGTGTGACGCCCAATCGTGCTCAGGCCCTAGTCCAATGCCGCGATC 36883 Query 25317 TTCGTC---GCGCTTTTCGTGATACCAGCCGATCGCGTCCAAGCCGGCCTCTGTCGTCGC 25373 ||||| ||| |||||||||||| || | || || | ||| ||| || || | Sbjct 36884 GTCGTCTTTGCG---TTCGTGATACCAACCCAAGGCATCAAGACCGCCCTGCGTGGTGTC 36940 Query 25374 TTGGTTGAACCACATGCTGGGGAATAGACGCCGT-GCC--GCCTCTACGCGCTGCATTGC 25430 || |||||||||||| ||| |||| ||| ||||| ||| |||| | ||| | | || Sbjct 36941 TTCGTTGAACCACAT-CTGCGGAA-AGA-GCCGTCGCCCTTCCTCGATGCGAGCCTTCGC 36997 Query 25431 CGCACCCGCCCCTTGGTTCTTAACGACCTGCACTTCGA--ACCCTGCGGCCCGTAGTGCG 25488 ||| ||| || |||||| || || || ||| | || || || || ||| Sbjct 36998 CGCGCCCTTGCCCTGGTTCGGAATAACGGTGAC--CGAATAGCCGGCCTGCCTCAGCGCG 37055 Query 25489 CTCTCGAATGATACGTCATGCACCTTGTCGTTAGTGCTGCCATCGTGGGGCAATACGCAG 25548 |||||| | || || | | |||||||| | || ||||||||| || || ||| Sbjct 37056 CTCTCGTACGAGACAGCGTAAACCTTGTCCTGCGTTGCGCCATCGTGAGG---TAGCCAG 37112 Query 25549 A---GCGCC--GCCC--CGTAT--CCGTTTGCCCGCAGCCACTCGATATGCGCCGCCAGA 25599 | ||||| | || ||||| || | |||| |||| || ||||| |||| Sbjct 37113 ATCTGCGCCTTGTCCGGCGTATAACCCCGCGATCGCATCCACGTGAGATGCGTGGCCAAG 37172 Query 25600 GGTTGCCCCTGCGCCTCGTAGTAGTTCAGCAGGCGAATTTCGCGTCCGACGTACTG 25655 ||||| ||| ||||| || | |||| |||||||||||| |||| | |||| Sbjct 37173 TCCTGCCCAACCGCTTCGTAATAATCGAGCACGCGAATTTCGCGGCCGATGAACTG 37228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134567885990100