Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq1433 100 1e-16 seq2095 89.7 2e-13 >seq1433 Length=2545 Score = 100 bits (110), Expect = 1e-16 Identities = 278/415 (67%), Gaps = 16/415 (4%) Strand=Plus/Plus Query 21405 CAAGTCTGACCGCACTGGCACAGGCACCAAGTCCGTATTCGGTGCCCAGATGGAATTCGA 21464 |||| | |||||||| || || ||||| ||| ||||| ||||||| ||||| Sbjct 1292 CAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGA 1351 Query 21465 TCTGCGTGAGGGCTTCCCCCTGCT--CCAG-AAGAAGA-CCACCCCCTTCACCACGATCT 21520 ||| || |||||||| ||| | ||| |||||| ||||| | | | ||| Sbjct 1352 CCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACC----TGAAATCCATCA 1407 Query 21521 TCACCGAGCTCTCGTGGATGATGCAGGGCCTGACCAATGTGAACTGGCTACAGCAAAAG- 21579 || |||||| |||| | || ||||| || | | ||| ||| | || | | Sbjct 1408 TCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGC-GCGAGCGC 1466 Query 21580 GGC-TGCCACATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGG 21638 ||| || | |||||||||||||||||| | || |||| ||| || ||| | || || Sbjct 1467 GGCGTGAC-CATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGG 1525 Query 21639 TGCCCAGTGGCGCAGCATCCAAGGCCCCGATGGAAAGAACATCGACCAGCTGGCCAAGGC 21698 | |||||||||||| | ||||| || | ||||||||||| | ||| | || Sbjct 1526 CGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGC 1585 Query 21699 AC--AAGAGCTGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAAC 21756 |||| | | | | | |||||| |||||||||||||| | ||||||||| Sbjct 1586 GGTGAAGACCATCAA--GGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAAC 1643 Query 21757 GTGGCCGAGCTCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811 ||||| || || ||||||| ||| | || ||||| ||| | |||||||||| Sbjct 1644 GTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCT 1698 Score = 98.7 bits (108), Expect = 5e-16 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 21955 TGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGC 22014 ||| | || || |||||||| || ||||| |||||||||||||| ||||||||||||||| Sbjct 1722 TGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGC 1781 Query 22015 TACGCGCTGCTGACGCACCTCATGGCG 22041 |||||||| || |||||| | || ||| Sbjct 1782 TACGCGCTACTCACGCACATGATCGCG 1808 >seq2095 Length=1157 Score = 89.7 bits (98), Expect = 2e-13 Identities = 74/89 (83%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 21953 GCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCA 22012 ||||||| ||||| |||||| || ||||| ||||| |||||||| ||||||||||||| Sbjct 1042 GCTGCAA-CTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCA 1100 Query 22013 GCTACGCGCTGCTGACGCACCTCATGGCG 22041 |||| |||||||| || ||| | ||||| Sbjct 1101 GCTATGCGCTGCTCACCCACATGCTGGCG 1129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236634331426325