Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1639 167 2e-36 >seq1639 Length=831451 Score = 167 bits (184), Expect = 2e-36 Identities = 342/506 (68%), Gaps = 23/506 (5%) Strand=Plus/Minus Query 19322 AACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAA 19381 || |||||||| | | || || ||| |||| || || ||||| || || || | Sbjct 522384 AAAAATTGGGAATTCAGCACGTCAAAGGAATTTTACTCTACGGGCCTCCTGGAACGGGTA 522325 Query 19382 AAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAAATTG 19438 |||| || ||||| ||| | || ||||| | |||| | || | || |||| ||| Sbjct 522324 AAACGTTGATTGCCAGACAGATTGGTAAAATGCTTAATGCTAAGGAGCC---CAAAGTTG 522268 Query 19439 TAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTT 19498 | ||||| || ||| || | ||||||| ||| || ||||| ||||||||||| || Sbjct 522267 TCAATGGCCCCGAAGTCCTCAATAAATTTGTCGGCCAATCTGAAGAAAATGTTAGAAAAC 522208 Query 19499 TGTTTGCTGACGCTGAAGAAGA--ACAA--AAACGTTTAGGGCGCAAAAGTTCTTTGCAC 19554 | || |||||||||||| |||| |||| ||| | ||| ||||| | ||| Sbjct 522207 TTTTCGCTGACGCTGAAAAAGAGTACAAGGAAAAG----GGGGAGGAAAGTGGACTTCAC 522152 Query 19555 ATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG---------TTCTGGT 19605 ||||| || | |||||| |||| || | || ||||||||||| ||| Sbjct 522151 ATTATTATTTTCGATGAACTGGATGCTGTTTGCAAGCAAAGAGGCAGCGGGGCCGGCGGT 522092 Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665 | | ||| || ||| | ||| || || ||||| |||| ||| | || |||||| | Sbjct 522091 GGTACTGGTGTCGGTGATAGTGTCGTGAACCAACTTTTGTCTAAACTTGATGGTGTTGAT 522032 Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCC 19725 || |||| |||||| || | ||||| ||||| || | ||| | || ||| |||| Sbjct 522031 CAGTTGAACAATATTCTATTGATTGGAATGACCAACCGGAAGGATATGATTGACGACGCC 521972 Query 19726 TTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGA 19785 | |||||||| || || ||||| | | || |||||| |||||| |||||| ||| Sbjct 521971 CTTTTACGACCAGGCCGTTTGGAGGTGCACATGGAAATTTCCTTACCGGATGAAAAAGGA 521912 Query 19786 CGTGTGGAAATTTTAAACATACATAC 19811 | ||| | ||| |||| || ||||| Sbjct 521911 AGAGTGCAGATTCTAAAGATTCATAC 521886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397441104715375