Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2550 127 3e-24 seq2473 107 2e-18 >seq2550 Length=338734 Score = 127 bits (140), Expect = 3e-24 Identities = 708/1111 (64%), Gaps = 48/1111 (4%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGT-CGG--GCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGA 110387 ||||||||||||| | | ||| ||| | | |||||||||||||| || ||||| | Sbjct 313349 TGAACTGAATTGGCGCAGAAGCT---GCCATCGTACGGAGATAGTACATGCCTGTCTTCA 313405 Query 110388 GTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCA 110447 || | |||||| | | ||||| || || ||| ||| || || |||| Sbjct 313406 AACCAAGCTTCCATCCCGCAAAGTGCATGCTAGTGATTTTGCCCATGGTAGG---TTCCT 313462 Query 110448 TGAAGAG---GTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT 110504 ||| | | ||| | | ||| ||||||||||| ||||| | || |||| | Sbjct 313463 TGAGGTGAATGTTGAGAGATTGGGACTGGTCAATGAATGCACCCCGATCGGCAGCCAGTT 313522 Query 110505 CAATGACA-TCCTTCATCTTA-ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATC 110562 ||| | | ||| | | | || ||||| ||||| |||||| || ||||| | Sbjct 313523 GAATAATGGTTCTT--TGTGAGATCTCCCATACTGTCTTGTAGAGAGCTTTAATATCTGC 313580 Query 110563 TGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC-ATGAGA---TCCTTCA 110618 ||||| | || || ||||||| || || || |||| | |||| | | |||| Sbjct 313581 AGGGATGTTTGGAATGTTCTGGACCGAGCCACC----TTCAGCGATGATACGGTTTTTCA 313636 Query 110619 TATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGA 110678 | | | ||||| || || | | | ||| || || | || | ||||||| Sbjct 313637 TGTTGTCTGACCAAAGGCCGAGATCCACGAGATCCTTCAGAAGCCACGGATTGACAACCT 313696 Query 110679 CAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATT 110738 || |||||||| || || ||| ||| ||||||| ||||||||||||||| |||| Sbjct 313697 GGAATTCACCTGCAAGAACTCGTCTAGAGTAAATGTTTGATGTGTATGGTTCAAAACATT 313756 Query 110739 CATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAA--AAGACT 110796 | ||| || | || || ||| |||||||||||| || || | ||| ||| || Sbjct 313757 CGTTAAATCCGAGAATCTGACTTGTGCTGGCTGTTGGCATAGGAGCGA-CAAGCAAG-CT 313814 Query 110797 GTTACGAAGACC--CTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT--CGTAGTTGA 110852 ||||| | ||| || | | || ||| ||||| | |||||| | | || | | Sbjct 313815 ATTACGCACACCATGTTTTGCAATATCTGTT--TTGAGCAAATCCCAATCCCAAAGATCA 313872 Query 110853 GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCT 110912 | | || |||| || |||||| ||| | || | || || | || ||||||| || | Sbjct 313873 G-TAGGCGTCACGTT-CCACATATCATATTGCAAAACGCCCTTAGAAACGGGAGAGCCTT 313930 Query 110913 CAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGT 110972 || |||| ||||||| ||| | ||| || | || ||| ||| || | |||| Sbjct 313931 CATAGGTCTCATAGGGACCGTCAACTTTGGCTAGGTCGCAGGACGCGGTCAAAGCGGCGT 313990 Query 110973 GATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGT 111032 |||| |||||||| || || | ||||| || ||| || || ||||| || | Sbjct 313991 GATAAATGGTTTCGAATATCTGGATATTCAGCTGCTTTGCCTCTGGGGAATCGAACGGCA 314050 Query 111033 AGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTC 111092 | || | || || |||| || || || || ||||| | | || || | || | Sbjct 314051 ATCGCAAAGCAAGGAAAGCATCGGCAAGGCCCTGCACACCGACGGCGATTGGACGATGAC 314110 Query 111093 GCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGT 111149 | | ||| |||||| || ||| ||||||||| || | ||||||| | || Sbjct 314111 GGAAGTTACTCTTTCGGGC---TTCAGGGACGGGATAATGGTTGTTATCAATGATTTTGT 314167 Query 111150 TTAGATTTTTGGTAAC---AATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGC 111206 | | | ||| ||| || | ||| | || || | || || | ||| | || Sbjct 314168 TCAAA---TTGCGAACGAGAACTTGTGTAACCTCGTGTAACTTGCCAAAGTCATACTCGC 314224 Query 111207 GAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 111266 | | | |||||| | || || || | ||||| | |||||||| || | Sbjct 314225 CACGGACGGGGTCGACATATGTGGGCAGCGCAAGAGATGCTAGGTTGCAAACCGCAACTT 314284 Query 111267 CATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCA 111326 |||| |||||||| | ||||| || || |||||||| || |||||| || | Sbjct 314285 CATCTGGCGAGGTGTACTCGATGATTTCCGTGCACAAGTTGGAGCTACGAATCGTTCCGA 314344 Query 111327 AATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 111386 || || ||||| || || |||||| || ||||||||||||||| |||| | || | Sbjct 314345 GGTTTTTCTGGTTGCTTTTGCGGTTGCATGCGTCCTTGTAGAGCATGAAGGGATTTCCGG 314404 Query 111387 TCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 |||| || || | || || ||||| | ||| Sbjct 314405 TCTCGGTTTGAGCTTCTAGGATAGCATACCA 314435 >seq2473 Length=337605 Score = 107 bits (118), Expect = 2e-18 Identities = 296/455 (65%), Gaps = 18/455 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || || || ||||||||||||||||||||||| ||| | || || || |||||| Sbjct 140601 TAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACCAGCCAGCGAGATATTGTCCATA 140542 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCA----CCCCAACTTGTTTG 122481 ||||| ||||| || | || || | | | | || || || ||| Sbjct 140541 AAGTCGAATGGGTTAGTGGCATTATAGAACTTTTTGTTGCCAAGAGCCACAA-------- 140490 Query 122482 AGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATG 122541 | | || || | || |||| ||||| | |||| || |||||||| || | Sbjct 140489 -GCAACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGGAGTTCATTCCAAGC 140431 Query 122542 AGGTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACG 122601 || ||| ||||| || || | ||| | |||||||| ||||| |||||| | | Sbjct 140430 AGAGCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAACTGCCTCTGTGATA 140371 Query 122602 ATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661 ||||| | | | | || | |||| | || | ||| || ||| |||| Sbjct 140370 ATGGCTTCAACGGCCTGGGGACTGGGCCGATGATGCATGTGAGAAAACAGCAGGCAGGCA 140311 Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721 || || ||| ||||||||||| || || || | ||| || || ||| ||||| ||| Sbjct 140310 AAGTCAGTGTGAAGACCCTCATCACGAGAGATCAATTCGTTCGAAAAGGTAAGACCAGGC 140251 Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 122781 || ||||| |||||||| | ||| |||| | ||| || ||| |||||| || ||| Sbjct 140250 ATAAGACCGCGCTTCTTTAGCCAGAAAATGGAAGCGAAGGAGCCGCTGAAGAAAATTCCC 140191 Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 || ||| ||||| |||| | ||| | |||||| Sbjct 140190 TCGACAGCAGCAAAGGCAATCAAGCGCTGGGCGAA 140156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628007860020000