Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2550 114 2e-20 seq573 95.1 1e-14 seq2473 86.0 7e-12 >seq2550 Length=338734 Score = 114 bits (126), Expect = 2e-20 Identities = 492/760 (65%), Gaps = 22/760 (3%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | ||||| || | ||||||||||||| || | || | |||||| ||||| ||| Sbjct 314435 TGGTATGCTATCCTAGAAGCTCAAACCGAGACCGGAAATCCCTTCATGCTCTACAAGGAC 314376 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || || |||| || || || || || || | || ||| || ||||| | || Sbjct 314375 GCATGCAACCGCAAAAGCAACCAGAAAAACCTCGGAACGATTCGTAGCTCCAACTTGTGC 314316 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || |||||| | || | || |||||| || || || ||||| ||||| | Sbjct 314315 ACGGAAATCATCGAGTACACCTCGCCAGATGAAGTTGCGGTTTGCAACCTAGCATCTCTT 314256 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 105126 || || |||| ||||| || || | | | | | ||| | || || | ||||| Sbjct 314255 GCGCTGCCCACATATGTCGACCCCGTC-CGTGGCGAGTATGACTTTGGCAAGTTACACGA 314197 Query 105127 AGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT 105186 ||||| || | || || | |||| | | ||||||| || ||| ||||| Sbjct 314196 GGTTACACAAGTTCTCGTTCGCAATTTGAACAAAATCATTGATAACAACCATTATCCCGT 314137 Query 105187 ---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGG 105243 ||| || || || ||| | | || |||||||| | ||||||| ||||| Sbjct 314136 CCCTGAA---GCCCGAAAGAGTAACTTCCGTCATCGTCCAATCGCCGTCGGTGTGCAGGG 314080 Query 105244 TCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 105302 || || |||| ||| || ||||| || | || |||||| || || ||| | Sbjct 314079 CCTTGCCGATGCTTTCCTTGCTTTG-CGATTGCCGTTCGATTCCCCAGAGGCAAAGCAGC 314021 Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCGAGTTCAGAGTTG 105361 | ||| | ||||| || ||||| |||||||||||| |||| ||| | || | Sbjct 314020 TGAATATCCAGATATTCGAAACCATTTATCACGCCGCT-TTGACCGCGTCCTGCGACCTA 313962 Query 105362 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 105421 || | ||||| ||||| ||||| |||| ||| || ||||| | ||| | || || | Sbjct 313961 GCCAAAGTTGACGGTCCCTATGAGACCTATGAAGGCTCTCCCGTTTCTAAGGGCGTTTTG 313902 Query 105422 CAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGAAGCTCTCAAGG 105479 |||| |||||||| |||| |||| || | || || | || ||||| ||||| Sbjct 313901 CAATATGATATGT-GGAACGTGACGCCTA-CTGATCTTTGGGATTGGGATTTGCTCAA-- 313846 Query 105480 AACGCATCAAGGAGA--AGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGC 105537 ||| || | | | | ||| | ||||| || | || | ||||| ||||||||||| Sbjct 313845 AACAGATATTGCAAAACATGGTGTGCGTAATAGCTTGCTTGTCGCTCCTATGCCAACAGC 313786 Query 105538 CTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 | ||| || || | || ||| ||||| |||||||| ||||| | ||||| || Sbjct 313785 CAGCACAAGTCAGATTCTCGGATTTAACGAATGTTTTGAACCATACACATCAAACATTTA 313726 Query 105598 -TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 ||| ||| || || || || || || | ||||||| Sbjct 313725 CTCT-AGACGAGTTCTTGCAGGTGAATTCCAGGTTGTCAA 313687 >seq573 Length=143031 Score = 95.1 bits (104), Expect = 1e-14 Identities = 198/288 (69%), Gaps = 8/288 (3%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 ||||| ||||| ||| |||||| | ||| ||| ||||||||||| ||| | ||||| Sbjct 55335 AGACCTTTGATATGGCTACCGTCATGATCTTGATCAGTCATGATCATAAGATGGCCATAG 55276 Query 169229 CGAAG--CTCG-GAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTG 169285 ||||| |||| | | | || || ||||| || || |||||||||| || ||| Sbjct 55275 CGAAGCCCTCGCGTGTC--CGTG-TATTCCTTTTTGTGCTGCAGACCCAAGAAATTTTTG 55219 Query 169286 AGATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTT 169344 | || ||||| |||||| || | || ||| ||||| || ||||| ||||| Sbjct 55218 ATAT-TTTGAATCTCTTGATTCTTGGAGATCTGGTCAACAGATGCGTCGCGGACATTGAG 55160 Query 169345 ACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGC 169404 ||| || ||||| |||||||| || || |||| ||||| || | || || Sbjct 55159 TAGCTTTCCTCGAAGGGGGAAGACGCCAAAGAGATCGGCGCCAACAACAGCTCTTCCAGC 55100 Query 169405 GACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 | ||| ||| ||| || || || || ||||||| ||||| ||||| Sbjct 55099 CATTGCAAGACCCTTGGCAGAATCTCCTTCGGTGAGAATGAGTGTACA 55052 >seq2473 Length=337605 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875 || ||||| ||| ||||| || |||||| || |||||| | |||| ||||| Sbjct 140174 GCCTTTGCTGCTGTCGAGGGAATTTTCTTCAGCGGCTCCTTCGCTTCCATTTTCTGGCTA 140233 Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935 |||||||| ||||| ||||| ||||| ||| || ||||| | ||||||||||| ||| Sbjct 140234 AAGAAGCGCGGTCTTATGCCTGGTCTTACCTTTTCGAACGAATTGATCTCTCGTGATGAG 140293 Query 94936 GGACTCCACCAAGAGTTTGC 94955 || || ||| || ||||| Sbjct 140294 GGTCTTCACACTGACTTTGC 140313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583238380913000