Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2550 122 1e-22 seq1915 95.1 1e-14 >seq2550 Length=338734 Score = 122 bits (134), Expect = 1e-22 Identities = 349/535 (65%), Gaps = 4/535 (1%) Strand=Plus/Plus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||||||||| | || || || ||| | ||| || | || | ||| || || Sbjct 314563 TCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTCCAATCACCG 314622 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | ||||||||| | |||||| | || ||| |||| || || |||||| || ||| Sbjct 314623 TTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAGAGATCACGG 314682 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 | || || || | || |||||| || || || ||||| || | ||| |||| Sbjct 314683 GCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAGATATCGGAA 314742 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| || || || ||||| ||||| | || || ||| ||| || || | ||| Sbjct 314743 TGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCTTGATCAACG 314802 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || || || || ||||| || || |||||||| || | || || | | ||| || Sbjct 314803 TATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAAGAGCCATTT 314862 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGA--GCAGTGGATTCCGATGCCCC 79663 || || || | || | || || | | ||| | || | || || || | Sbjct 314863 GTGCCTGCAATATAGGAGCCAGTGGCTCGGA--TACGATGGACGTTAAGACCAATACCAC 314920 Query 79664 CGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGT 79723 | | |||||| || |||| || |||||| || ||||| ||||| ||||| | Sbjct 314921 CAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCGATGCTAT 314980 Query 79724 CGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGA 79783 | ||||||||| ||| || || || | ||| ||||| | | ||| || ||||||| Sbjct 314981 CTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCCGCGTTGA 315040 Query 79784 AGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTC 79838 | ||||| || | || || ||||| || || ||| ||||| || || ||||| Sbjct 315041 AAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTCTC 315095 Score = 118 bits (130), Expect = 1e-21 Identities = 322/490 (66%), Gaps = 5/490 (1%) Strand=Plus/Minus Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225 ||||| || | ||||| |||||| || ||||| || || | || |||||||||||| Sbjct 315095 GAGACCTATAATTTGATGTCCCAGAAATTTTTCACTCATGCTTCACCCACCCTTTTCAAC 315036 Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285 || || ||| | | || || ||| | ||||| || | | ||||||||| || ||| Sbjct 315035 GCGGGAACGCCCCAGCCACAAATGGCTTCTTGTTTTCTTATCGATATGAAGGAAGATAGC 314976 Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345 || || ||||| ||||| || |||||| || |||| || |||||| | || ||| Sbjct 314975 ATCGACGGCATTTACGATACTCTCAAGACTTGTGCGCTGATTTCCAAGACAGCTGGTGGT 314916 Query 19346 ATCGGGATCCACTGC--TCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACG 19403 || || | || | ||| |||||| | | ||| | || || || || | Sbjct 314915 ATTGGTCTTAACGTCCATCG--TATCCGAGCCACTGGCTCCTATATTGCAGGCACAAATG 314858 Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463 | | | || || | || |||||||| ||||| ||||| || || | ||||| Sbjct 314857 GCTCTTCTAATGGAATTATACCTATGCTCCGTGTCTTTAACAATACCGCTCGATACGTTG 314798 Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523 | || || ||| |||||| ||| | ||||| |||||||| || || ||||| | | Sbjct 314797 ATCAAGGTGGCAACAAACGGCCAGGCGCCTTCGCAATCTACCTTGAACCTTGGCATTCCG 314738 Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583 | || | || || || || || ||| |||||| || | || || || | || | Sbjct 314737 ATATCTTTGAATTTCTGGATCTTCGCAAGAACCACGGAAAGGAAGAAGTGAGAGCCCGTG 314678 Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643 | |||||| || | |||| || || | |||||| | ||||||||| ||| | Sbjct 314677 ATCTCTTCCTTGCTCTTTGGACCCCAGATTTGTTCATGAAACGAGTTGAGAAGAACGGTG 314618 Query 19644 AATGGCACCT 19653 | ||| |||| Sbjct 314617 ATTGG-ACCT 314609 >seq1915 Length=2587 Score = 95.1 bits (104), Expect = 1e-14 Identities = 276/420 (66%), Gaps = 14/420 (3%) Strand=Plus/Plus Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442 |||||| |||||||||||||| ||||||| | |||| | || ||||| Sbjct 1868 CATGAACAGGTCCGGGATCCAGTTGGCCGTGTTCATGTCGTGCGTGCGGCGGCGGTCGTC 1927 Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502 ||| |||| |||||||| || || ||| ||||| |||||| |||||| || Sbjct 1928 GCCGGTGTTCTTGCGCAGCTCCAGGAACTCCTCCATGTCCAGGTGCCAGCTCTCCAGGTA 1987 Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562 | || || || ||||||||||| |||||||||||| || | ||| |||| ||| Sbjct 1988 GGTGCAGACCGCGCCCTTGCGCTT---GCCGCCCTGGTTCACCGCCACGGCGGTGTCGTT 2044 Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA--CGCCGTTCGTCCCGTTGATTCGT 79620 | || || | ||||| | ||| | |||| ||||||| || || ||||| | Sbjct 2045 CACCACCTTCAGGAACGGCACCACGCC--CTGCGATTCGCCGTTGGTGCCCTTGATGTGC 2102 Query 79621 GTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATG 79680 | || ||| || | | | |||| | | || | || || | ||||||| | Sbjct 2103 GAGCCCAGCGCGCGCACGCGGGTCCAGTCGTTGCCCAGCCCGCCCGCGAACTTGGACAGC 2162 Query 79681 TGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACC 79740 ||||| ||||||| || |||||||||||| || | ||||||| || | | Sbjct 2163 AGCGCGTTTTCCTTGATCGACTCGTAGATGCCGTC---CAGGTCGTCCGGCACCGTGGTG 2219 Query 79741 AGGAAGCAGCTCGACATCTG--TGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCG 79798 ||| ||||| |||| ||| || | | ||| ||| |||||| || ||||| |||| Sbjct 2220 AGGTAGCAGGAGGACAGCTGGCTGCGCAG--CGTGCCGCTGTTGAACAGCGTCGGGGTCG 2277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548503716078000