Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2726 181 1e-40 seq2257 134 2e-26 seq2473 120 3e-22 seq1061 116 4e-21 seq2550 102 9e-17 seq2508 98.7 1e-15 >seq2726 Length=527079 Score = 181 bits (200), Expect = 1e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| |||||||| ||||| || || |||||||| |||||| ||||| || | Sbjct 136952 GTCAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAGTCATCTGATACTATCGAC 136893 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || ||||| | || |||||||||||||| || |||||||| |||||||| ||| | ||| Sbjct 136892 AACGTGAAGACCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTTTGATT 136833 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| |||||||| | || || || | || ||||| | ||||||||| Sbjct 136832 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCTGATTATAACATTCAAAAGGAA 136773 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||||||||| || | ||||| |||||||| Sbjct 136772 TCTACTCTTCATCTTGTTCTTCGTCTCCGCGGTGG 136738 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || || ||||| ||||| || Sbjct 137265 ATGCAGATCTTCGTCAAGACCCTGACGGGAAAGACCATCACCCTCGAGGTGGAGTCTAGT 137206 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || || ||||||||||| || ||||| |||||| Sbjct 137205 GACACTATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 137146 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||||||||| || || || |||| ||| ||||| | ||||| || Sbjct 137145 CAACGCTTGATCTTTGCTGGTAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTACAAC 137086 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| || || ||||| Sbjct 137085 ATTCAGAAGGAGTCTACCCTTCA 137063 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || || || || || || || || || ||||||||| Sbjct 136508 ATGCAGATTTTCGTGAAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGTCATCG 136449 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || ||||| || || || || ||||| ||||||||| Sbjct 136448 GACACAATCGACAATGTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAG 136389 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || ||||| || ||||| || || |||| || || || | || ||||| Sbjct 136388 CAACGACTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGGACGCTTTCCGATTATAAC 136329 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||| |||||| || | || ||| | | || ||||| Sbjct 136328 ATTCAGAAAGAAAGCACTCTGCACTTGGTGTTGAGATTGCGTGGTGG 136282 >seq2257 Length=132105 Score = 134 bits (148), Expect = 2e-26 Identities = 147/192 (77%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 27407 TGCAAAT--CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||| ||| ||||||||||| |||||||||||||| || |||||||| ||||| | Sbjct 93609 TGCAAATAGCTTCGTCAAGACGCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAG 93668 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | ||| ||||| || ||||| ||||||||||| || || ||||| || Sbjct 93669 CGACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGCATCCCCCCAGATCA 93728 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 ||| || | || || || || ||||| ||||| || | ||||| | ||| || |||| Sbjct 93729 GCAACGATTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGTACTTTGAGC-GATTATA 93787 Query 27584 ATGTCCAAAAGG 27595 || ||||||||| Sbjct 93788 ATATCCAAAAGG 93799 >seq2473 Length=337605 Score = 120 bits (132), Expect = 3e-22 Identities = 151/207 (73%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 64662 TAAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCG 64718 ||| |||||||| |||||||| || ||||| | ||| | ||| | || | ||||| Sbjct 140107 TAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGATCAGGAATCGACATTCGCCCAGCG 140166 Query 64719 TCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTT 64778 | || ||||| ||| || ||||||||||| || || ||| ||| ||||| Sbjct 140167 CTTGATTGCCTTTGCTGCTGTCGAGGGAATTTTCTTCAGCGGCTCCTTCGCTTCCATTTT 140226 Query 64779 CTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCG 64838 ||||||||| ||||| || || ||||| ||||| | ||||||||||| |||||||||| Sbjct 140227 CTGGCTAAAGAAGCGCGGTCTTATGCCTGGTCTTACCTTTTCGAACGAATTGATCTCTCG 140286 Query 64839 GGACGAGGGGCTCCACCAAGAATTTGC 64865 || ||||| || ||| || ||||| Sbjct 140287 TGATGAGGGTCTTCACACTGACTTTGC 140313 >seq1061 Length=321426 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| ||||||||||||||||| || || ||||||||||| |||||| Sbjct 107847 GACAAGGAGGGCATTCCCCCAGACCAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTCGAG 107788 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | || || || | || ||||| ||||| ||||| || ||| | Sbjct 107787 GACGGCCGCACTCTTTCTGATTACAACATTCAGAAGGAGTCCACCCTTCACCTCGTCCTC 107728 Query 27619 CGTCTTCGCGGTGG 27632 ||||| || ||||| Sbjct 107727 CGTCTCCGTGGTGG 107714 >seq2550 Length=338734 Score = 102 bits (112), Expect = 9e-17 Identities = 442/688 (64%), Gaps = 27/688 (4%) Strand=Plus/Plus Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447 ||||| ||||| || ||||| ||||| |||||| |||||| ||||| || || Sbjct 313731 GTTTGATGTGTATGGTTCAAAACATTCGTTAAATCCGAGAATCTGACTTGTGCTGGCTGT 313790 Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCC---TCGCG 80504 ||||| || |||| | || ||| |||| || || || ||||| | | | Sbjct 313791 TGGCATAGGAGCGACAAGCAAGCTATTACGCACACCATGTTTTGCAATATCTGTTTTGAG 313850 Query 80505 CAAATCTGA---CCAAAAATCAACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAG 80559 |||||| | ||||| |||| | || || || |||||| || | ||||| Sbjct 313851 CAAATCCCAATCCCAAAGATCAGT----AGGC-GTCACGTTCCACATATCATATTGCAAA 313905 Query 80560 ATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGC 80619 | ||||| || | ||||| || | | ||||| || || || || ||||| || Sbjct 313906 ACGCCCTTAGAAACGGGAGAGCCTTCATAGGTCTCATAGGGACCGTCAACTTTGGCTAGG 313965 Query 80620 TCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCG 80679 || || ||| | | | || |||||||||||| || || | | |||| | | Sbjct 313966 TCGCAGGACGCGGTCAAAGCGGCGTGATAAATGGTTTCGAATATCTGGATATTCAG-CTG 314024 Query 80680 CGC-GCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTG 80738 | |||| |||| ||||||| ||| | || | ||| | || || |||||||| Sbjct 314025 CTTTGCCTCTGGGGAATCGAACGGCAATCGCAAAGCAAGGAAAGCATCGGCAAGGCCCTG 314084 Query 80739 AACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCC-GGAATTGGGT 80797 || |||| |||||| || || || || ||| || |||| || | || | || | Sbjct 314085 CACACCGACGGCGATTGGACGATGACGGAAGTTAC-TCTTTCGGGCTTCAGGGACGGGAT 314143 Query 80798 AAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAA 80857 || ||| ||||| |||| ||||| ||||| | ||| ||||||| || || | Sbjct 314144 AATGGTTGTTATCAATGATTTTGTTCAAATTGCGAACGAGAACTTGTGTAACCTCGTGTA 314203 Query 80858 GTTTCTGAAAGTCGAATTGGTTCCCCT-------TC-ACAAATGCCGGAAGGCTCAGGGA 80909 || |||||| | | | || | || ||| ||| || || || || Sbjct 314204 ACTTGCCAAAGTCATACTCG--CCACGGACGGGGTCGACATATGTGGGCAGCGCAAGAGA 314261 Query 80910 CGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAA 80969 || || ||||| || || || || || | || |||||| ||||||||||||||| Sbjct 314262 TGCTAGGTTGCAAACCGCAACTTCATCTGGCGAGGTGTACTCGATGATTTCCGTGCACAA 314321 Query 80970 ATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTT 81029 || || ||| || || |||||||||||||| ||| |||||| |||||||| Sbjct 314322 GTTGGAGCTACGAATCGTTCCGAGGTTTTTCTGGTTGCTTTTGCGGTTGCATGCGTCCTT 314381 Query 81030 GTAGCACATGTACGGGGTACCGGTCTCG 81057 |||| |||| | || | ||||||||| Sbjct 314382 GTAGAGCATGAAGGGATTTCCGGTCTCG 314409 Score = 82.4 bits (90), Expect = 9e-11 Identities = 340/531 (64%), Gaps = 18/531 (3%) Strand=Plus/Plus Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCA 81291 |||||||| || ||| |||| || || ||| || || ||| | | | || || Sbjct 314638 TTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAGAGATCACGGGCTCTCACTTCTTCC 314697 Query 81292 TCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGA 81351 | || ||||| ||| | || ||||| || | ||| || | |||||| || || || Sbjct 314698 TTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAGATATCGGAATGCCAAGGTTCAAGG 314757 Query 81352 TACACGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTC 81405 || | |||| | | ||| || || |||||| || | ||||| || || || Sbjct 314758 TAGATTGCGAAGG-CGCCTGGC--CGTTTGTTGCCACCTTGATCAACGTATCGAGCGGTA 314814 Query 81406 GCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATA 81465 |||||| ||||| | |||||| || || |||| || || || || || | ||| Sbjct 314815 TTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAAGAGCCATTTGTGCCTGCAATA 314874 Query 81466 CGCGACCCCTTGGCGCGCACCTTGCTGATTGA----AAGACCGATGCCACCTGACCACTT 81521 || || |||| || | | | ||| || |||||| || ||||| | ||| Sbjct 314875 TAGGAGCCAGTGGCTCGGA---TAC-GATGGACGTTAAGACCAATACCACCAGCTGTCTT 314930 Query 81522 TGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCAT 81581 |||||| | ||||| || | || || ||||| || ||||||||||||| ||||| Sbjct 314931 GGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCGATGCTATCTTCCTTCAT 314990 Query 81582 GTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGG 81641 || | | ||||| | ||| || || | || || ||||| || || || Sbjct 314991 ATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCCGCGTTGAAAAGGGTGGG 315050 Query 81642 GGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAAT 81701 | || ||| ||||| | | ||||||| | |||||| || || | ||| Sbjct 315051 TGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTCTCAATGGCCTTCTCAAT 315110 Query 81702 ATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTG-GGGCG 81751 ||| || || ||||| || | || |||||||||| ||||| || ||||| Sbjct 315111 ATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGTTGCGGGCG 315161 >seq2508 Length=12345 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 24758 GGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGT 24817 ||||||||| || || ||| |||| ||| ||||||||||| ||| || |||| ||| Sbjct 1413 GGTGCAGGAAACACCGCAGCGCGAGAACACACCATTTTATCCCCGATCACCATATGCGGT 1472 Query 24818 CTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGC 24877 ||||| | | ||| || ||||| || ||||||||| || ||| |||| ||||| || Sbjct 1473 AGCAAAGCTATACGCATATTGGATGACGGTGAACTACCGAGAAGCCTATGGCATATACGC 1532 Query 24878 ATGCAACGGAATTCTGTTCAACCATGA 24904 ||||| || || ||||| || || || Sbjct 1533 TTGCAATGGCATCCTGTTTAATCACGA 1559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570288478694000