Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2726 134 9e-27 seq1061 86.0 4e-12 >seq2726 Length=527079 Score = 134 bits (148), Expect = 9e-27 Identities = 162/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 ||||||||| || |||||||| || || |||||||||||||| ||||| || || | || Sbjct 136296 CAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAAAGCGTCCGGCCATC 136355 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 |||||| || || |||||||| || | || || ||||| || || | || || || || Sbjct 136356 TTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAATACCTTCTTTATC 136415 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTAT 34670 | ||| ||||| ||||| | |||||||| || | ||| ||||||| || || Sbjct 136416 T-TGAATCTTTGTCTTAACATTGTCGATTGTGTC--CGATGACTCAACTTCCAGCGTGAT 136472 Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || | |||||||| ||||||||||| Sbjct 136473 CGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 114 bits (126), Expect = 8e-21 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || || | ||||| || || || |||||| |||||||| || || ||| Sbjct 137039 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAA 137098 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | |||||||| |||||||| ||||| || || || || ||||| || || Sbjct 137099 AGGGTTCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGG 137158 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || || || || || ||| ||||| |||||| Sbjct 137159 ATGCCCTCCTTGTCTTGGATC-TTGGTCTTGACATTATCAATAGTGTCACTAGACTCCAC 137217 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || | ||| || || || || || | || || || || ||||||||| || Sbjct 137218 CTCGAGGGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCATGGTG 137269 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | ||| ||||| |||||||||||||||||||| || || || || Sbjct 136747 AGACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGG 136806 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || ||||| || || ||||| || ||||| || || | || ||| Sbjct 136807 CCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCC 136866 Query 34609 TTGTC 34613 ||||| Sbjct 136867 TTGTC 136871 >seq1061 Length=321426 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| |||||| |||||||| ||||| ||||| || || |||| || || || Sbjct 107738 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGCTGC 107797 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615 ||||| || || || | |||||| ||||| || || | ||||||||||||| Sbjct 107798 TTACCAGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTG 107849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314717805016475