Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2726 131 1e-25 seq2257 86.0 5e-12 >seq2726 Length=527079 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| ||||||||||| ||||||| | ||||| ||| | ||| Sbjct 136736 ATGCAAATTTTCGTGAAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCC 136677 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||||||||| || ||||| || || || |||||| Sbjct 136676 GACACAATCGACAATGTAAAAACCAAAATTCAAGATAAGGAAGGAATTCCGCCAGATCAA 136617 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||||| || ||| | || || | || | || |||||||| Sbjct 136616 CAACGTTTGATTTTTGCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACAAT 136557 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| |||||||| | || | || | || ||||| ||||| || Sbjct 136556 ATTCAAAAAGAGTCGACTCTGCACCTTGTCCTTCGCTTGCGTGGTGGTAT 136507 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || ||||| || ||| | || || || || ||||| | Sbjct 137267 CCATGCAGATCTTCGTCAAGACCCTGACGGGAAAGACCATCACCCTCGAGGTGGAGTCTA 137208 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 ||| | ||||| | ||||| || || |||||||| || ||||| || || || | Sbjct 137207 GTGACACTATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACC 137148 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | || || || || | || || ||||| | ||||| || ||| |||| || |||| Sbjct 137147 AGCAACGCTTGATCTTTGCTGGTAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTACA 137088 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||||| |||||||| ||| | || |||||| Sbjct 137087 ACATTCAGAAGGAGTCTACCCTTCACTTGGTT 137056 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || ||||| ||||| ||| | || || ||||| ||||| | || || | || || Sbjct 136952 GTCAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAGTCATCTGATACTATCGAC 136893 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | || || || ||||| ||||| |||||||| || || || || || ||||| || Sbjct 136892 AACGTGAAGACCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTTTGATT 136833 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| || | || ||| | || | || ||||| |||||||||||||| Sbjct 136832 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCTGATTATAACATTCAAAAGGAA 136773 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | ||| | ||| | ||| | || ||||| || Sbjct 136772 TCTACTCTTCATCTTGTTCTTCGTCTCCGCGGTGGTAT 136735 >seq2257 Length=132105 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/191 (70%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 26989 TGCAGATA--TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||| ||| || || || || || ||||||||| |||| || ||||| ||||| || Sbjct 93609 TGCAAATAGCTTCGTCAAGACGCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAG 93668 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || ||||||||||| || ||||| || || ||||| Sbjct 93669 CGACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGCATCCCCCCAGATCA 93728 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || || || || | |||||| || || | |||||| | || | |||||| || Sbjct 93729 GCAACGATTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGTACTTTGAGCGATTATAA 93788 Query 27167 CATTCAAAAGG 27177 || ||||||| Sbjct 93789 TATCCAAAAGG 93799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434901682824000