Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq787 203 1e-47 >seq787 Length=7589 Score = 203 bits (224), Expect = 1e-47 Identities = 250/335 (75%), Gaps = 10/335 (3%) Strand=Plus/Minus Query 40090 GCCGAAGGTCCCGATCTG--TG-CGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCG 40146 |||||||||| ||||||| || || ||| | ||||| |||||| || | |||||| Sbjct 4855 GCCGAAGGTCGCGATCTGGCTGACGGCCTCG-CGGCC--GTACTTGTCCTTCACGTACTC 4799 Query 40147 GATGACCTCGCCGCGAC--GCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACG 40204 ||||||| | | || ||| | || |||||||||||| | ||| ||||| |||||| Sbjct 4798 GATGACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACG 4741 Query 40205 CGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTG 40264 ||||| ||||||||||| |||||||| | || || || || ||||||||||||||| Sbjct 4740 CGCTCCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTG 4681 Query 40265 ATCCCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCAC 40324 ||| ||| | ||||| |||||||| ||||| | || || || || || |||||| Sbjct 4680 ATCTTGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGG 4621 Query 40325 ACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAG 40384 |||||| | |||||||||| |||||||||| | |||| |||||||| ||||| Sbjct 4620 CAGCCGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAAT 4561 Query 40385 CCCATCTGGATGATCATGTCGATCTCGTACTGGAG 40419 ||||||| | ||| | |||||||| ||| ||| Sbjct 4560 CCCATCTTCAGGATGGTCCCGATCTCGAACTCGAG 4526 Score = 140 bits (154), Expect = 1e-28 Identities = 222/315 (70%), Gaps = 14/315 (4%) Strand=Plus/Minus Query 39033 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCG 39092 ||||||||| ||||||| |||||| | | ||| |||| |||| ||| |||||| | Sbjct 6005 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 5946 Query 39093 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACA------ 39146 | | ||||| |||||||||| |||| || ||||| | | || ||| | | Sbjct 5945 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 5886 Query 39147 CCGCCTGGATG-GCGCTGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39205 |||||| |||| ||| | | | |||| ||||| | ||| |||| || | Sbjct 5885 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 5833 Query 39206 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCC 39265 | || ||||| |||||| ||||||||||||||| ||||| ||||||||||| || Sbjct 5832 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 5773 Query 39266 TGGCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATG 39325 |||||| ||||||| | ||||||||||| | || | |||||| |||||||||| Sbjct 5772 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACC 5713 Query 39326 ATGAGCCCGTACGTC 39340 |||| ||||| ||| Sbjct 5712 ATGATTCCGTAGGTC 5698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160400542660050