Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq787 161 3e-35 >seq787 Length=7589 Score = 161 bits (178), Expect = 3e-35 Identities = 235/330 (71%), Gaps = 4/330 (1%) Strand=Plus/Minus Query 38998 CCGTACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATC 39057 ||| | ||||||||||| ||| || | ||||||||| || | |||||| ||| Sbjct 4854 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 4795 Query 39058 ACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCT 39115 || | | ||| | | | || |||||||||||| | ||| ||||| || || |||| Sbjct 4794 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 4737 Query 39116 CAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCC 39175 | ||||||||||| |||||||| | || || ||| ||| || |||||||||||| Sbjct 4736 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 4677 Query 39176 CGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGC 39235 ||| | || || ||||||| || || | || || || || ||||||||| || Sbjct 4676 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 4617 Query 39236 CGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCA 39295 |||| | ||| |||||| |||||||||| | |||| ||||||||| ||||| |||| Sbjct 4616 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 4557 Query 39296 TCTGGTTGATCATGTCGATCTCGTACTCGA 39325 ||| ||| | |||||||| |||||| Sbjct 4556 TCTTCAGGATGGTCCCGATCTCGAACTCGA 4527 Score = 120 bits (132), Expect = 1e-22 Identities = 216/311 (69%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999 ||||||||| ||||||| |||||| | | ||| |||| |||| || |||||| | Sbjct 6005 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 5946 Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGC-- 38057 | | ||||| |||||||||| |||| || ||||| | | || ||| | | | | Sbjct 5945 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 5886 Query 38058 CCGGATGGCAGCCTCCGAGTAGCCTCGCT-CGCTCGCCCCCTTCTGGAAGTTCACGAACT 38116 ||| | ||| || | || || ||| ||| ||| | |||| || | | Sbjct 5885 CCGCCTTCT--CCTGCGCGATCCCATTCTTCGC-CGCGCCCGCCCGGAAAATCTCCCGGT 5829 Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176 || ||||| | |||||| ||||||||||||||| || || || || ||||| || | Sbjct 5828 GCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGC 5769 Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236 | || ||||| ||| ||||||||||||| | || | |||||| |||||||||| |||| Sbjct 5768 CCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGA 5709 Query 38237 GCCCGAAGGTC 38247 ||| ||||| Sbjct 5708 TTCCGTAGGTC 5698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159709367899650