Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028910.1 Length=55617 Score E Sequences producing significant alignments: (Bits) Value seq1153 129 2e-25 >seq1153 Length=764 Score = 129 bits (142), Expect = 2e-25 Identities = 175/240 (73%), Gaps = 12/240 (5%) Strand=Plus/Plus Query 42853 GTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGCCCACCGTGTCCCCG 42912 || |||||||| ||| ||||||| || ||||||| || ||||| ||||| ||| Sbjct 529 GTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCAATCCG 588 Query 42913 TTCCACGCCGAGGCGATCTTCCACGGC---CGCAAACACGGCTTCGACTACCTCGGCATG 42969 ||||||||| || ||| ||| ||| ||||||||| | | | | |||||| Sbjct 589 TTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGGGCATG 645 Query 42970 ATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCTGGT-C 43028 ||||||||||| ||||| || ||||| || ||||||||||| ||||| ||| | || | Sbjct 646 ATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---TCGTAC 702 Query 43029 AGAGCAGTGC--AAAGACGCCACCAAGATGGGGGTCGGCTCCCCGGAATACGTTCTGCTG 43086 || | ||| || |||| ||| |||||||| |||| ||| |||||||| |||||| Sbjct 703 AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCTGCTG 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177846305593850