Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028946.1 Length=59652 Score E Sequences producing significant alignments: (Bits) Value seq1153 125 3e-24 >seq1153 Length=764 Score = 125 bits (138), Expect = 3e-24 Identities = 176/239 (74%), Gaps = 10/239 (4%) Strand=Plus/Plus Query 45782 GTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACGGTGTCCCCG 45841 || |||||||| ||| ||||||| || ||||||| || ||||| || || ||| Sbjct 529 GTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCAATCCG 588 Query 45842 TTCCACGCCGAGGCGATCTTCCACGG-ACGCAAACACGGCTTCGACTACCTCGGCATGAT 45900 ||||||||| || ||| ||| | || ||||||||| | | | | |||||||| Sbjct 589 TTCCACGCCAAGTGCATCGAGCACTATATGCGC-CACGGCTTCCAGTTCATGGGCATGAT 647 Query 45901 CACCGTCGTCACCGATGTGGTCCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCCGA 45960 ||||||||||||||| || || || || ||||||||||| ||||| ||| | || | | Sbjct 648 CACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---TCGTAC-A 703 Query 45961 GC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATTCTGCTG 46015 || || ||| || |||| ||| ||||||||| |||| ||| |||||| | |||||| Sbjct 704 GCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCTGCTG 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190757834104100