Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028954.1 Length=36065 Score E Sequences producing significant alignments: (Bits) Value seq2653 82.4 2e-11 >seq2653 Length=16217 Score = 82.4 bits (90), Expect = 2e-11 Identities = 171/252 (68%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 21960 CTTGGGGCAGGACCCCGAGATTCGGACATTCCAGAACGGCGGCAAGGTGGCGAACCTGCG 22019 |||||| | ||||| ||| || | || ||||||||||||||||||| ||| |||| Sbjct 1067 CTTGGGTCGCGACCCTGAGTCGCGCTCGTTTCAGAACGGCGGCAAGGTGGTAAACTTGCG 1008 Query 22020 CATTGCCACCACCCGCCGGTGGAAGTCCAAGAACACGGGCGAGGTGCAGGAAGAAACCGA 22079 ||| || |||| | | |||||| || |||||||| ||||| | ||||| Sbjct 1007 CATCGCGACCAGCGAAAGCTGGAAGGATCGCAATTCGGGCGAGCGCAAGGAAAAGACCGA 948 Query 22080 ATGGCATTCGGTCGTTGTGACCAATGAGGCCCTTGTCAACAACGTG---GAACGCTATCT 22136 |||||||||||||| | ||| || | |||| | || ||| || || | || Sbjct 947 ATGGCATTCGGTCGCGATATTCAACGAAG-GCTTGGC--GAATGTGGCCGAGCGGTTCCT 891 Query 22137 GAAAAAAGGTTCCTATGTCCGAATTGAGGGGCGCTTGCGGACCCGAAAATGGCAGGATCA 22196 | || || || | ||| || ||||| | | | |||||| ||||||||||| || Sbjct 890 GCGCAAGGGGTCGAAGGTCTATATCGAGGGCCAGCTACAGACCCGGAAATGGCAGGACCA 831 Query 22197 GAACGGGACCGA 22208 | ||| ||||| Sbjct 830 GTCCGGCACCGA 819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115282190245050