Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq787 170 6e-38 >seq787 Length=7589 Score = 170 bits (188), Expect = 6e-38 Identities = 238/332 (72%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 39429 TGCCGTACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGA 39488 ||||| | ||||||||||| ||| |||| ||||||||| || | |||||| || Sbjct 4856 TGCCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGA 4797 Query 39489 TCACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCG 39546 | || | | ||| | | | || |||||||||||| | ||| ||||| || ||||| Sbjct 4796 TGACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCG 4739 Query 39547 CTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGAT 39606 ||| ||||||||||| |||||||| | || || ||| ||| || ||||||||||| Sbjct 4738 CTCCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGAT 4679 Query 39607 CCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACAC 39666 | ||| | || || ||||||| || || | || ||||| || ||||||||| Sbjct 4678 CTTGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCA 4619 Query 39667 ACCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCC 39726 ||||| | ||| |||||| |||||||||| | |||| ||||||||| ||||| || Sbjct 4618 GCCGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCC 4559 Query 39727 CATCTGGTTGATCATGTCGATCTCGTAGTCGA 39758 ||||| ||| | |||||||| | |||| Sbjct 4558 CATCTTCAGGATGGTCCCGATCTCGAACTCGA 4527 Score = 114 bits (126), Expect = 4e-21 Identities = 216/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 38373 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 38432 ||||||||| ||||||| |||||| | | ||| |||| |||| || |||||| | Sbjct 6005 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 5946 Query 38433 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGC-- 38490 | | ||||| |||||||||| |||| || ||||| | | || ||| | | | | Sbjct 5945 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 5886 Query 38491 CCGGATGG--CAGCGTCCGAGTAGCCTCGCTCGCTTGCTCCCTTCTGGAAGTTCACGAAC 38548 ||| | | ||| ||| | | | |||| || ||| | |||| || | Sbjct 5885 CCGCCTTCTCCTGCG--CGA-TCCCATTCTTCGCC-GCGCCCGCCCGGAAAATCTCCCGG 5830 Query 38549 TCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGA 38608 | || ||||| | |||||| ||||||||||||||| || || || || ||||| || Sbjct 5829 TGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCG 5770 Query 38609 CCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATG 38668 || || ||||| ||| ||||||||||||| | || | |||||| |||||||||| ||| Sbjct 5769 CCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATG 5710 Query 38669 AGCCCGAAGGTC 38680 | ||| ||||| Sbjct 5709 ATTCCGTAGGTC 5698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160234148736250