Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq2726 105 5e-18 >seq2726 Length=527079 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| |||||||| || || || ||| ||||||| | || || ||| | || Sbjct 136736 ATGCAAATTTTCGTGAAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCC 136677 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| || ||| ||||| || || ||||| ||||| || | Sbjct 136676 GACACAATCGACAAT--GTAAAAACCAAAATTCAAGATAAGGAAGGAATTCCGCCAGATC 136619 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || |||||||||||||| ||| | || || | || | | || ||||||| Sbjct 136618 AACAACGTTTGATTTTTGCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACA 136559 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | || ||||||||| ||| |||| | || | || |||||||| || Sbjct 136558 ATATTCAAAAAGAGTCGACTCTGCACCTTGTCCTTCGCTTGCGTGGTGG 136510 Score = 100 bits (110), Expect = 2e-16 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| |||||||| || ||||| ||| || || | || || || || | Sbjct 136508 ATGCAGATTTTCGTGAAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGT-CATC 136450 Query 27850 G---ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 | || || ||||| || || ||| || || ||||||||| |||| || Sbjct 136449 GGACACAATCGACAAT--GTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGAC 136392 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTA 27965 |||||||| | || ||||||||||| || | || || | || | |||| |||||||| Sbjct 136391 CAGCAACGACTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGGACGCTT-TCCGATTA 136333 Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| || ||||| |||||| |||| ||||| ||| | |||||||| || Sbjct 136332 TAACATTCAGAAAGAAAGCACTCTGCACTTGGTGTTGAGATTGCGTGGTGG 136282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355849063500525