Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2726 167 5e-36 seq1061 102 2e-16 >seq2726 Length=527079 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| |||||||| || || ||||| ||||||||||| | || || | || || Sbjct 136753 AGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCC 136812 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || | ||||| ||||||||||||| |||||||||||| Sbjct 136813 TCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 136872 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| ||||| || ||||| || ||||| || ||||| ||| Sbjct 136873 TGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTC 136932 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || |||||||| || Sbjct 136933 TTTCCGGTAAGAGTCTTGAC 136952 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| | ||| | || | ||| |||||| ||||| || ||||||||||| | ||| || Sbjct 136287 ACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAAAGCGT 136346 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || |||||||| |||||||| || || |||||||| ||||| ||||| || |||| || Sbjct 136347 CCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGAATACC 136406 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || || || |||||| || || || ||||| ||||| || ||||| || || Sbjct 136407 TTCTTTATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAACTTCCAG 136466 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| ||||| || || || || | |||||| Sbjct 136467 CGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || || ||||| || || | |||||| | |||||| Sbjct 137054 AGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCT 137113 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || || ||||| | |||||| ||||||||||| | || |||||||| Sbjct 137114 TCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCT 137173 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || || |||||| || |||||||| ||||| ||| Sbjct 137174 TGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGGTC 137233 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| || ||||| || || | |||||| Sbjct 137234 TTTCCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||||||||| || || ||||| | || || | ||||| Sbjct 136525 AGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCC 136584 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || || || || | |||||||| || || |||| ||||||||| || Sbjct 136585 TCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCT 136644 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||| || || ||||| ||||| ||| |||||| || | || || || Sbjct 136645 TGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTT 136704 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || || || | ||||| Sbjct 136705 TTGCCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 >seq1061 Length=321426 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| |||||||| || || ||||| ||||| | ||| || | || || Sbjct 107729 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCC 107788 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || |||||||| || ||||||||||| || || ||||| || |||| || |||||||| Sbjct 107789 TCGAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 107847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159106331222375