Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2726 138 8e-28 >seq2726 Length=527079 Score = 138 bits (152), Expect = 8e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| ||||| |||||||||||||| || |||||||| || || Sbjct 136508 ATGCAGATTTTCGTGAAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGTCATCG 136449 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| || ||| ||| || ||||||||| | || ||||| || Sbjct 136448 GACACAATCGACAATGTTAAGAC-AAAGATTCAAGATAAAGAAGGTATTCCACCAGACCA 136390 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || || | || |||||||| || || || ||||| | || || | |||||| || Sbjct 136389 GCAACGACTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGGACGCTTTCCGATTATAA 136330 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||| ||| | || || || || || ||||| || || Sbjct 136329 CATTCAGAAAGAAAGCACTCTGCACTTGGTGTTGAGATTGCGTGGTGG 136282 Score = 129 bits (142), Expect = 4e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| |||||||| || || ||||| || || | |||||||| ||| | Sbjct 136736 ATGCAAATTTTCGTGAAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCC 136677 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||||| |||| || || || ||||| | ||||||||||| Sbjct 136676 GACACAATCGACAATGTAAAAACCAAAA-TTCAAGATAAGGAAGGAATTCCGCCAGATCA 136618 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || |||||||| || ||||| || || | || || | |||||||| Sbjct 136617 ACAACGTTTGATTTTTGCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACAA 136558 Query 23790 CATACAAAAAGAGTCCAC 23807 || ||||||||||| || Sbjct 136557 TATTCAAAAAGAGTCGAC 136540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337996932562100