Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2473 116 3e-21 >seq2473 Length=337605 Score = 116 bits (128), Expect = 3e-21 Identities = 202/292 (69%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| | || ||||| || || || || | || ||||| ||||| || || | Sbjct 139987 CTTGA-TGTACGTGTCAATGAGGAGAGAGTATGTCTCGGAATGGATATTCTCCATCATGA 139929 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 |||| |||||||||||||| | ||| |||| | |||||||| | ||||| || | Sbjct 139928 TCTGGAATCCGTAAAAGCAACGAGCCTCTGGAATCTGAACTTCAGCGCTGAATCTCTCGA 139869 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992 | | || || || || || || || ||| || || || |||| || |||| || | Sbjct 139868 CAAGATTCTCATTGACGATGCCATCGGAGGCGGCGAAGAAGGCCAGGACGCGAGAGATGA 139809 Query 4993 AGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 |||| |||| || || ||| | ||||||| | | |||||| | ||||| | Sbjct 139808 AGTAGCGTTCATCGTCGTTCAGTCGATGGTTCCAGTCATGGAGATCTTTGGACAAATCGA 139749 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 ||||||| ||||||| || || ||||| |||||||||||||| |||||| Sbjct 139748 TTTCTTCAGCAGTCCAGAAGGATGCTTCGGCTTTTTTGTACATTTGCCAAAT 139697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427033595648975