Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq1153 114 4e-21 seq1948 93.3 1e-14 >seq1153 Length=764 Score = 114 bits (126), Expect = 4e-21 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 1706 GTGAAGGATCGCATCATTCCCGGCGGAATGACCGGCCTTGGCTTCCAGACCGTCTACCCC 1765 |||||||| || ||| | ||| | | |||||||| || | | ||||||| | || Sbjct 529 GTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCAATCCG 588 Query 1766 TTCCACATGGAAGTGACTCGAGC-CTTCGTCAAGCATGGCTGGGCCTATATGGGCATGAA 1824 |||||| ||||| |||||| || | || |||| | |||||||||| Sbjct 589 TTCCACGCC-AAGTGCATCGAGCACTATATGCGCCACGGCTTCCAGTTCATGGGCATGAT 647 Query 1825 GACCATCGTCACCGACGTGGTTCGCGAGAACGCCCAGACCTACCGCCTTTCGTGGACGGA 1884 ||| ||||||||||||| || ||||||||| ||||||||||||||| |||| | || Sbjct 648 CACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTGTCGTACAGCGA 707 Query 1885 GCAGTGCAAGGACGGCACCAAGATGGGTGTCGGCATGCCCGAGTACTTGCTG 1936 | | ||||||||||| |||||||| ||||| ||||| ||| ||||| Sbjct 708 GATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCTG 759 >seq1948 Length=731 Score = 93.3 bits (102), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046 ||| || || ||||| |||||||| ||| ||||||||| | | || || |||| || Sbjct 116 GCCATTCCGCTGCTTGCTGATGATCACCTCGGCCACGCCGGGCTCCTTGGAGTCCTTGTT 57 Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGC 34100 ||| ||||| ||||| | ||||||||| |||||||||||||||||||| || Sbjct 56 GTAGTAGTCGTCGCGGTAGATGAACATGATGACGTCGGCGTCCTGCTCGATGGC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160458140556750