Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2550 244 2e-59 seq2473 109 8e-19 >seq2550 Length=338734 Score = 244 bits (270), Expect = 2e-59 Identities = 595/898 (66%), Gaps = 10/898 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || | |||||| |||| || || ||||||||||| | ||| | | Sbjct 314554 TCAAACTCGTCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTC 314613 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | | || ||| |||||||| || | ||| || |||| ||||||| || Sbjct 314614 CAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAG 314673 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| |||||| ||||| ||||| |||||| || || || | Sbjct 314674 AGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAG 314733 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 ||||| |||||||| ||||| || || || || | | || || ||||| || || || Sbjct 314734 ATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCT 314793 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 ||||| | |||| || || || ||| | || | | ||| || ||||| || ||||| Sbjct 314794 TGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAA 314853 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | |||||||| || | |||||| ||| || || ||| | | || || Sbjct 314854 GAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGACCA 314913 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || || || || ||||| || | || || || ||||| || Sbjct 314914 ATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCG 314973 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || ||||| ||| |||| | | ||||||||| || |||||| | || ||||| Sbjct 314974 ATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCC 315033 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || || | || || || ||||||||||| |||| | || | | ||| || || Sbjct 315034 GCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 315093 Query 77060 TCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 ||||| | ||||| |||||| | ||||||||| || || |||||||| | ||| | Sbjct 315094 TCAATGGC--CTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGT 315151 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 | || || || || || || || ||| | || ||||| | || | || | Sbjct 315152 GTTGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTGTCT 315211 Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGT 77237 | || |||||||| | ||| ||| || | || || | ||| |||| || |||| | Sbjct 315212 TGAATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGAGTTAAGTTCCT 315271 Query 77238 CCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAATAATTGG---AGATCGTATTC 77294 | || ||| ||||||| || | || |||||| || || || || | Sbjct 315272 CAGCATGTTTCATAACAATTTCATAGGTTTTGTGAGAAATCATGGGCGCAGGACGGTT-- 315329 Query 77295 CATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttG 77354 ||||| || || ||| | | | ||| || || ||| ||| | || || | Sbjct 315330 -GTTTTTTGGGTTGGTATAATGGTAAAGGTCGTCAATAACGGACGAGAATTGCTTCTTCG 315388 Query 77355 TTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 | | || || || ||||||||||||||||| ||||| ||||| || || |||||||| Sbjct 315389 TCTGTTTATGCAGGTTCGATACGGCTATTCTGGCAGCAAGAATCGCGTAATCAGGATG 315446 >seq2473 Length=337605 Score = 109 bits (120), Expect = 8e-19 Identities = 181/258 (70%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || ||||| || || || || ||||| ||||||||||| || | || || | |||| Sbjct 139953 TCGGAATGGATATTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCTGGAATC 139894 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGC 47045 || || || | | |||| || ||||| ||||||||| || || ||||| || || Sbjct 139893 TGAACTTCAGCGCTGAATCTCTC-GACAAGATTCTCATTGACGATGCCATCGGAGGCGGC 139835 Query 47046 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCA 47102 || || |||| || | || || || ||||||| ||||| | ||||| Sbjct 139834 GAAGAAGGCCAGGACGCGAGAGATGAAGTAGCGTTCATCGTCGTTCAGTCGATGGTTCCA 139775 Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 ||||| || |||||| || | ||| | ||||||||| |||||||| || || || ||||| Sbjct 139774 GTCATGGAGATCTTTGGACAAATCGATTTCTTCAGCAGTCCAGAAGGATGCTTCGGCTTT 139715 Query 47163 TTTATACATATTCCATAT 47180 ||| ||||| | ||| || Sbjct 139714 TTTGTACATTTGCCAAAT 139697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712906996584000