Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq1433 242 2e-59 seq2095 123 1e-23 >seq1433 Length=2545 Score = 242 bits (268), Expect = 2e-59 Identities = 401/571 (70%), Gaps = 32/571 (6%) Strand=Plus/Plus Query 820 TGGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCT 879 ||||| | | ||| || |||||||| |||||||||| ||| ||||||| |||| | Sbjct 1283 TGGCACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGAT 1342 Query 880 GCGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATC 939 ||||| |||||| | ||| |||||||||||||| ||||| ||| |||||| | ||||| Sbjct 1343 GCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATC 1402 Query 940 GGTTGCGTACGAACTTCTGTGGTTCCTC-AGTG-----GCGACACGAACGTGAAGGCGCT 993 | |||| || ||||||||||| || | |||||| ||| ||| || Sbjct 1403 CATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAAC---AAGCTGCG 1459 Query 994 CAACGACAACGGCGTCACCATCTGGGACGAGTGGGC---CGACGCCGGCGGAAACCTCGG 1050 | || |||||| |||||||||||||| ||||| ||| | ||||| |||| || Sbjct 1460 C---GAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCG---ACCTGGG 1513 Query 1051 TCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGA- 1109 || || ||||||| ||||||||| ||||| ||| | || || || | | Sbjct 1514 GCCGGTGTACGGCGTGCAGTGGCGCAGCTGGC----CGACACCCGA----CGGCGGGCAC 1565 Query 1110 -TTGACCAGATCTCGGCCGCCGTGGAG--CTGCTTCGCGAGGACCCTGACTCGCGCCGGA 1166 | ||||||||| | | || ||| || | | || | | || ||||||||||| | Sbjct 1566 ATCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCA--ATCCGGACTCGCGCCGCA 1623 Query 1167 ACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACA 1226 | | || ||| |||||||| | ||| || | ||||| || || |||||| Sbjct 1624 TCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACG 1683 Query 1227 TCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCG 1286 | |||||| | ||||||| |||||| ||| ||| ||| | ||||||||||| | Sbjct 1684 CGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTG 1743 Query 1287 CGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGT 1346 | ||||| ||||| || ||||||||||| |||||| |||||||| ||| |||||||| Sbjct 1744 CCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCACATGA 1803 Query 1347 TCGCGCAGCAGGCCGGCCTGCGGGTGGGTGA 1377 ||||||||||| || |||| ||| || || Sbjct 1804 TCGCGCAGCAGTGCGACCTGGCGGTCGGCGA 1834 Score = 123 bits (136), Expect = 1e-23 Identities = 142/191 (74%), Gaps = 15/191 (8%) Strand=Plus/Plus Query 1398 ACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGC 1457 ||||||||||||||| ||||||| ||| |||| | |||||||| ||| | || | Sbjct 2099 ACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACTGCAGCTCTCCCGCCAGCCCC 2158 Query 1458 GGCCCTACCCGAGGCTCGTGCT--ACACCACGCGC-------CGTCGATCTTCGACTACC 1508 |||||||| |||||| ||| || |||| |||||||||||||||||| Sbjct 2159 ATCCCTACCC------CGTGCTGGACATCAAGCGCAAGCCGGCGTCGATCTTCGACTACC 2212 Query 1509 GGTACGAGCACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGG 1568 |||||||| || || | || || ||||| | | || ||| ||||||||||||| |||| Sbjct 2213 GGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCAAGGCGCCCGTGG 2272 Query 1569 CCGTCTGATGG 1579 | ||||||||| Sbjct 2273 CGGTCTGATGG 2283 >seq2095 Length=1157 Score = 123 bits (136), Expect = 1e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 1176 CCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCC 1235 |||| |||||| ||| || ||| || |||||| || ||||| || | |||||| Sbjct 954 CCGCCTGGAACCCCGGCGATCTCCACGCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCC 1013 Query 1236 AGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGT 1295 || || |||| |||||||||| |||||||| ||||||||||| || ||||| | Sbjct 1014 AGACCTATGTCGCGAACGGCCGGCTGTCGCTGCAACTCTACCAGCGCTCGGCCGACATCT 1073 Query 1296 TCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGC 1355 |||| || ||||||||||| |||||| || ||||| ||| | |||||| | ||||||| Sbjct 1074 TCCTTGGCGTGCCGTTCAACATCGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGC 1133 Query 1356 A 1356 | Sbjct 1134 A 1134 Score = 102 bits (112), Expect = 5e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||||||||| |||||||| ||| |||||| |||| |||||| ||| || || Sbjct 517 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 576 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGT-TGCGTACGAACT 954 |||||||||||| || ||||||| ||| | ||| | ||| | ||| ||| | Sbjct 577 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGT-CGAGTT 635 Query 955 TCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCAT 1014 ||||||||||| | |||||||| |||||| ||| | || | |||| ||| Sbjct 636 GCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCAT 695 Query 1015 CTGGGACGAGTGGGCCGA 1032 ||||||||| ||||| || Sbjct 696 CTGGGACGAATGGGCGGA 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296120102020575