Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq1433 93.3 7e-14 seq2095 84.2 3e-11 >seq1433 Length=2545 Score = 93.3 bits (102), Expect = 7e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 |||||||| ||| | || | || |||||||| ||||||| ||||||||| ||| || Sbjct 1338 CAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTG 1397 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 |||||||| ||||||||| |||||||||| | || | | | | ||| | ||| Sbjct 1398 AAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTG 1457 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCGCGAGACGA 200300 ||| | || ||||| ||||||||||||||||| || || Sbjct 1458 CGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGA 1501 >seq2095 Length=1157 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 |||||||| ||| |||| || |||||||| || | || |||||||| || || Sbjct 556 CAGATGCGGTTCGATCTGGCCGAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTG 615 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 || || ||||| |||| || |||||||||| ||| |||||||| | | ||| Sbjct 616 CGCTCGATCATCGTCGAGTTGCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTG 675 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCG 200292 | ||| ||| |||| ||| ||||||||||||||| Sbjct 676 CAGGATCGCAAGGTCAGCATCTGGGACGAATGGGCG 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783329889600000