Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_031266.1 Length=44872 Score E Sequences producing significant alignments: (Bits) Value seq1153 123 7e-24 >seq1153 Length=764 Score = 123 bits (136), Expect = 7e-24 Identities = 176/241 (73%), Gaps = 14/241 (6%) Strand=Plus/Plus Query 39501 GTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGCCCACCGTGTCCCCG 39560 || |||||||| ||| ||||||| || ||||||| || ||||| ||||| ||| Sbjct 529 GTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCAATCCG 588 Query 39561 TTTCACGCCGAGGCGATCTTCCACGGC---CGCAAACACGGCTTCGACTACCTCGGCATG 39617 || |||||| || ||| ||| ||| ||||||||| | | | | |||||| Sbjct 589 TTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGGGCATG 645 Query 39618 ATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCC 39677 ||||||||||| ||||| || ||||| || ||||||||||| ||||| ||| | || | Sbjct 646 ATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---TCGTAC 702 Query 39678 GAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATTCTGCT 39733 ||| || ||| || |||| ||| ||||||||| |||| ||| |||||| | ||||| Sbjct 703 -AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCTGCT 761 Query 39734 G 39734 | Sbjct 762 G 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143463561147100