Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2726 114 3e-20 seq2257 84.2 5e-11 >seq2726 Length=527079 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||||||||| || |||||||| | | || | ||||| Sbjct 136525 AGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCC 136584 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| || || | | || || || | || ||||||||||| | Sbjct 136585 TCAAGTTGCTTT--CCGGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTAT 136642 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||||||||| ||| ||| | || | |||| || || ||||| | ||||||| Sbjct 136643 CTTGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAG 136702 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| || || || |||||||| | ||||| Sbjct 136703 TTTTGCCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||||||||| || ||||| ||||| ||||| | | ||| | || || Sbjct 136753 AGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCC 136812 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || |||||||| || | | |||||||| | | || |||||||| || Sbjct 136813 TCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 136872 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | | || || ||| || ||||| || || || Sbjct 136873 TGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTC 136932 Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094 || || || |||||||| |||| Sbjct 136933 TTTCCGGTAAGAGTCTTGACGA 136954 >seq2257 Length=132105 Score = 84.2 bits (92), Expect = 5e-11 Identities = 129/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 |||||||| || |||||| ||||| | || ||||| || ||||| |||||||||| Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTT--CCGGCGAAGA 93740 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | | ||||| || | | ||| || ||||| |||||||| || || ||| | | Sbjct 93739 TCAATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGT 93680 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | |||| ||| || ||||| || ||||| ||||| ||||| ||||| |||| Sbjct 93679 CGATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGA 93620 Query 152095 AG 152096 || Sbjct 93619 AG 93618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153775341263325