Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2726 178 3e-39 seq1964 93.3 9e-14 seq1061 93.3 9e-14 seq2257 89.7 1e-12 >seq2726 Length=527079 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| |||||||| |||| || | || || || || ||||||||||||| Sbjct 137038 ACCGCCACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGA 137097 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || ||||| || || ||||| || ||||||||||| ||||| |||||| || Sbjct 137098 AAGGGTTCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGG 137157 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||||| | || || |||| |||||||| || || || Sbjct 137158 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCAC 137217 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| ||||||| ||||| ||||| |||||||| Sbjct 137218 CTCGAGGGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| |||||| || || || | || |||||||| || ||||| |||| Sbjct 136509 ACCACCACGCAAGCGAAGGACAAGGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGA 136568 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| ||||| || |||||||| |||||||||||||| || ||| Sbjct 136569 GAGTGTACGGCCATCCTCAAGTTGCTTTCCGGCAAAAATCAAACGTTGTTGATCTGGCGG 136628 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| ||||| || || | |||||| | ||||| ||||| || | ||| || Sbjct 136629 AATTCCTTCCTTATCTTGAATTTTGGTTTTTACATTGTCGATTGTGTCGGAGGATTCAAC 136688 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || || || || |||| || || ||||| || ||||| Sbjct 136689 TTCCAATGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAAATTTGCAT 136736 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | |||| || | ||||||||||| || ||||| || || | Sbjct 136281 ACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGA 136340 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||| |||||||| || || || || ||||||||||| | ||||| ||||| || Sbjct 136341 AAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 136400 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| || || ||||| ||||||| || || | ||||| |||||||| | || || Sbjct 136401 AATACCTTCTTTATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAAC 136460 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || |||||||| || || || | || || ||||| |||||||| Sbjct 136461 TTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || ||||| | || ||| ||||| ||||| || |||| Sbjct 136737 ACCACCGCGGAGACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGA 136796 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| || ||||||||||| |||||| || Sbjct 136797 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGG 136856 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| | || ||| | |||||||| || || | || || Sbjct 136857 AATGCCTTCCTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCAC 136916 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 || || ||||| ||||| || || | |||||| |||| || Sbjct 136917 CTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTGACGACTA 136957 >seq1964 Length=3926 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 ||||| || |||||||| || ||||| |||||| ||| || || || || |||||| Sbjct 1162 GACCCGTACATCAACGTGGACCCGGGCACGATGTCGCCGTTCCAGCACGGCGAGGTGTTC 1221 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 |||||||| || || || || || || ||||| |||||||||||||| || ||| Sbjct 1222 GTGACGGACGACGGCGCGGAGACGGACCTGGACCTGGGGCACTACGAGCGCTTC 1275 >seq1061 Length=321426 Score = 93.3 bits (102), Expect = 9e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 282869 TGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC 282928 || ||||||||| || || || || || || | ||| || || || |||||||| || Sbjct 107710 TGCACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 107769 Query 282929 AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACC 282988 || ||| |||||||| ||||| || || || || || ||||| | ||| || ||||| Sbjct 107770 AGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCTGG 107829 Query 282989 CGGAATACCCTCCTTGTCT 283007 ||||| |||||||||||| Sbjct 107830 GGGAATGCCCTCCTTGTCT 107848 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 283006 CTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCG 283065 |||| ||||| | || || | || ||||||||||||| || || ||||| ||||| | Sbjct 107915 CTTGAATCTTGGTCTTGACATTGTCAATAGTGTCCGAAGACTCCACCTCGAGGGTGATAG 107974 Query 283066 TCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||||| | ||||| ||||| ||||||||||| Sbjct 107975 TCTTACCCGTGAGGGTCTTGACGAAGATCTGCATTTT 108011 >seq2257 Length=132105 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||| || || || | || ||||| || || || || || ||||| |||||| Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 93738 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 || ||||| || || || || |||||||||||||| ||| ||||| || || | || Sbjct 93737 AATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATC-TTGCTCTTCACATTGTC 93679 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | || || || || ||||| ||||| || || | ||||| ||||| Sbjct 93678 GATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGAA 93619 Query 283091 --TATCTGCA 283098 ||| |||| Sbjct 93618 GCTATTTGCA 93609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046697960111050