Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2726 190 5e-43 seq2257 132 1e-25 >seq2726 Length=527079 Score = 190 bits (210), Expect = 5e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| ||||| |||||||||||||| || || || || || ||| Sbjct 136505 CAGATTTTCGTGAAAACACTCACTGGAAAAACGATCACGCTGGAAGTTGAGTCATCGGAC 136446 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||| || |||||||| || || || ||||||||| Sbjct 136445 ACAATCGACAATGTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAGCAA 136386 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||| |||||||| ||||| |||||||| |||| ||| ||||||||||| | Sbjct 136385 CGACTTATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGGACGCTTTCCGATTATAACATT 136326 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 || |||||| || ||||| | || |||||| Sbjct 136325 CAGAAAGAAAGCACTCTGCACTTGGTGTTGAGA 136293 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || ||||| || ||||| || |||||||| |||||||| || || || |||| Sbjct 136954 TCGTCAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAGTCATCTGATACTATCG 136895 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || |||||||||||||| ||||| || ||||| ||||||||||| | | Sbjct 136894 ACAACGTGAAGACCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAACGTTTGA 136835 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | |||||||| || |||||||| || || | ||||| | ||||||||| | ||||| | Sbjct 136834 TTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCTGATTATAACATTCAAAAGG 136775 Query 178111 AATCAACACTGCATCTTGTT 178130 |||| || || ||||||||| Sbjct 136774 AATCTACTCTTCATCTTGTT 136755 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||||||||| || || || ||||| || || | || || ||| ||| ||| Sbjct 136733 CAAATTTTCGTGAAAACCCTGACCGGCAAAACTATTACATTGGAAGTTGAATCCTCCGAC 136674 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||| || || |||||||| || || || || ||| Sbjct 136673 ACAATCGACAATGTAAAAACCAAAATTCAAGATAAGGAAGGAATTCCGCCAGATCAACAA 136614 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || |||||||| || || || ||||| | || || | ||||| || | Sbjct 136613 CGTTTGATTTTTGCCGGAAAGCAACTTGAGGATGGCCGTACACTCTCTGATTACAATATT 136554 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 |||||||| || || ||||| ||||| Sbjct 136553 CAAAAAGAGTCGACTCTGCACCTTGT 136528 Score = 123 bits (136), Expect = 6e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || ||||| || ||||||||||||||||| ||| Sbjct 137262 CAGATCTTCGTCAAGACCCTGACGGGAAAGACCATCACCCTCGAGGTGGAGTCTAGTGAC 137203 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| || ||||| || || |||||||| ||||||||| Sbjct 137202 ACTATTGATAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAGCAA 137143 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || |||||||| |||||||| | || ||| | || || ||| | Sbjct 137142 CGCTTGATCTTTGCTGGTAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTACAACATT 137083 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || || || || |||| || Sbjct 137082 CAGAAGGAGTCTACCCTTCA-CTTGGTT 137056 >seq2257 Length=132105 Score = 132 bits (146), Expect = 1e-25 Identities = 147/194 (76%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 177920 GCTCCAAATT--TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA--- 177974 ||| ||||| ||||| || || ||||| || || || |||||||| |||||||| Sbjct 93607 GCTGCAAATAGCTTCGTCAAGACGCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCG 93666 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| ||||| ||||| || || || |||||||| ||||| || || ||||| || Sbjct 93667 AGC---GACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGCATCCCCCCA 93723 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||||||| | |||||||||||||| ||||||||||| || | ||| | |||| Sbjct 93724 GATCAGCAACGATTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGTACTTTGAGCGAT 93783 Query 178095 TATAACGTCCAAAA 178108 ||||| ||||||| Sbjct 93784 TATAATATCCAAAA 93797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203683774871550