Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2399 87.8 2e-12 >seq2399 Length=446898 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| || ||| | || ||||| ||||||||||| ||||| Sbjct 271849 ATATATGTGTCGATGAGGAGAGAGTAGGTCTCAGAGTGGATGTTCTCCATCATAATCTGG 271908 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| |||||||| | || || | || | ||| || || | || Sbjct 271909 AACCCGTAGAAGCAACGGGCTTCTGGGATCTGGATCTCACCACTGAAGCGCTCGACAAGG 271968 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAA 17394 ||||| |||||||| || ||| |||||||| || ||||| Sbjct 271969 TTTTCATTCACGATTCCATCGGAGGCGGCGAAGAAGGCCAA 272009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517523080297080