Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3355 138 1e-27 seq372 122 1e-22 >seq3355 Length=30814 Score = 138 bits (152), Expect = 1e-27 Identities = 199/278 (72%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTG 145730 ||||| || | || |||| ||||||| ||||| ||| ||| || | || | | Sbjct 8550 AGCTGCAGTTCCACCTGCTCGTGGTGGTTGCTGTAGATGTGGCAGTCGCCGCCGGTCCAG 8609 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 |||||||| ||| | | ||| | | || |||| ||||| || || || | ||| Sbjct 8610 -ATGAAGTCGCCGACCGCCAGGTCGCACTGCTGCGCGATCATGTGCGTGAGTAGCGCGTA 8668 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| |||||||| ||||| ||||| ||||| | |||||||||||||||||| Sbjct 8669 GCTGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGCACTGCGCTGGTACAGCTGGCA 8728 Query 145851 GGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || |||| ||| |||| |||||||||||| | | ||||||||||| ||| ||||| Sbjct 8729 CGACAGCTTGCCGTCCGCGACGTAGAACTGGAAGAACGCGTGGCAGGGCGCCAGCGCCAT 8788 Query 145911 GGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948 || | ||||||| |||||||||| ||| || || Sbjct 8789 CTTCGGGATGTCCGCCACGTTCCAGGCGCTGACGATGA 8826 >seq372 Length=11520 Score = 122 bits (134), Expect = 1e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 |||||| || || ||||| || || | || || | ||||| ||| ||||| | || Sbjct 10066 GATGAACTCGCCCGGCTCCAGCCCGCATTGCTGCGCCAGCATGTGGGTGAGCAGCGCATA 10007 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| |||||||| ||||| || || ||||| ||||||||||||| || || || Sbjct 10006 GCTGGCGATGTTGAACGGCACGCCAAGGAAGATGTCGGCCGAGCGCTGGTAGAGTTG-CA 9948 Query 145851 G-GAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCA 145909 | || ||| ||| ||| || ||| |||| ||||| || || |||| ||| |||| Sbjct 9947 GCGACAGCCGGCCGTTCGCGACATAGGTCTGGAACAGGCAATGACACGGCGCCAGCGCCA 9888 Query 145910 TGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945 ||||| | || || | |||||||||||||||| || Sbjct 9887 TGGCGTGGAGATCGCCGGGGTTCCAGGCGGTGACGA 9852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590051124283240