Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3158 98.7 8e-16 >seq3158 Length=82937 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| || ||||||||||||||||| | ||| || || ||||||| ||||| ||||| Sbjct 51212 GTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTCGAGCTGCTTGCCA 51153 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | | |||||||| || | ||| ||||| || |||||| || Sbjct 51152 GCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGGATCTTGGTCTTA 51093 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| |||||| | | |||| || | || |||||||| || || || || Sbjct 51092 ACATTGTCGATAGTATCGCTAGACTCCACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTC 51033 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 51032 TTGACGAAAATCTGCAT 51016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422241285785396