Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2399 154 2e-32 seq599 120 3e-22 seq3158 98.7 1e-15 >seq2399 Length=446898 Score = 154 bits (170), Expect = 2e-32 Identities = 207/285 (73%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||| | || ||| | ||| || Sbjct 272135 ATTTGGCAAATGTACAAGAAGGCCGAAGCATCCTTCTGGACTGCTGAAGAGATCGACTTG 272076 Query 116696 TCCAAGGA-CACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| | ||||| | || ||| | |||||| Sbjct 272075 TCCAAGGATCTCCA-CGACTGGAATCAGCGACTCAACGATGATGAACGCTACTTCATCTC 272017 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| ||||||| ||||||||| ||| || ||||| || || || || |||||||| Sbjct 272016 ACACGTCTTGGCCTTCTTCGCCGCCTCCGATGGAATCGTGAATGAAAACCTTGTCGAGCG 271957 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | ||| | ||| | | || || || ||||||||||| || ||||| || Sbjct 271956 CTTCAGTGGTGAGATCCAGATCCCAGAAGCCCGTTGCTTCTACGGGTTCCAGATTATGAT 271897 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||||||| | ||||| || | || || |||||||||||| || Sbjct 271896 GGAGAACATCCACTCTGAGACCTACTCTCTCCTCATCGACACATA 271852 Score = 141 bits (156), Expect = 1e-28 Identities = 267/385 (69%), Gaps = 6/385 (2%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| | || |||||| | | ||| || | |||| |||| | Sbjct 271717 AGAAGGCTGACTGGGCCATTCGATGGATCCAAGACCAAGAATCCACTTTCGCTCAGCGGC 271658 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| ||||| |||||||||||||| | ||||| ||| ||||| |||| || | Sbjct 271657 TGGTTGCCTTTGCGGCCGTCGAGGGTATTTTCTTCAGTGGCTCGTTCGCTTCCATTTTCT 271598 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 || | ||||| || || || ||||| ||||| || ||| || || || ||||| | | Sbjct 271597 GGTTAAAGAAGCGTGGTCTTATGCCTGGCCTTACCTTCTCGAATGAACTGATCTCTCGTG 271538 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT-TTGGTGCAGCGACCG 117220 |||||||||| || ||||||||||||| | || || ||| || || || || || Sbjct 271537 ACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTTTCTCATCTTCGT-CACCGCCCA 271479 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 || || || |||| || ||| ||||||| || || | |||||| | ||| | Sbjct 271478 GGCCCGCCGGCCGTCCAGGCCATCATCACCGAGGCAGTTGAGATCGAGAAAGAATTCTTG 271419 Query 117281 ACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 || || || || || |||| || || ||| | |||| | || | |||| || |||| Sbjct 271418 ACGGATGCCCTACC-TTGCGCCCTACTTGGAATGAATT-CTAAGCTCATGTGCCAGTACA 271361 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCT 117363 | |||||||| || ||||| || || Sbjct 271360 TTGAGTTCGTTGCTGACAGACTACT 271336 >seq599 Length=174198 Score = 120 bits (132), Expect = 3e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||||||| | ||||||||||| ||||||| ||| ||||||||||| || Sbjct 69641 GACAAGGAGGGCATCCCCCCAGACCAGCAACGTCTCATCTTCGCCGGCAAACAGCTCGAA 69582 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||||||| || || ||||||||||||||| |||| || || || || Sbjct 69581 GACGGCCGCACCCTCTCGGATTATAACATCCAGAAGGAGTCCACCCTTCACCTTGT 69526 >seq3158 Length=82937 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || ||||| || ||||| | || || ||| || || Sbjct 51548 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 51607 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || ||||||| ||||| ||||| || || | ||||| Sbjct 51608 GACACAATTGACAACG-TAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCA 51666 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| |||||||| || || || | || || ||| |||||||| Sbjct 51667 GCAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAA 51726 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| || || || |||| || ||||| || | || ||| | || || Sbjct 51727 CATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGG 51774 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || ||||| || ||||| | || || ||| || || Sbjct 51950 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 52009 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | || ||||||| ||||| ||||| || || | ||||| Sbjct 52010 GACACAATTGACAACG-TAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCA 52068 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| |||||||| || || || | || || ||| |||||||| Sbjct 52069 GCAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAA 52128 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| || || || |||| || ||||| || | || ||| | || || Sbjct 52129 CATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGG 52176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515196781524560