Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3158 123 4e-23 >seq3158 Length=82937 Score = 123 bits (136), Expect = 4e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || ||||| || || |||| | ||| | Sbjct 52178 ATGCAGATCTTCGTGAAGACCCTGACGGGAAAAACCATTACGTTAGAAGTCGAATCGTCA 52237 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| |||| ||| || |||||||||||||||||||| ||||| ||||| Sbjct 52238 GATACCATTGATAACGTTAAGACA-AAGATTCAAGATAAAGAAGGTATTCCACCAGATCA 52296 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || ||||| ||||| ||| | || ||| | || || | ||||| || Sbjct 52297 ACAGCGACTCATCTTTGCTGGAAAGCAACTCGAAGATGGCCGTACGCTTTCCGATTACAA 52356 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 ||||| || ||| ||| ||||||||||||| | || || ||||||| Sbjct 52357 CATTCAGAAGGAAAGCACTCTGCATTTGGTTTTGAGATTGCGTGGTGGTA 52406 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || |||| ||||| || || || |||| ||||| | Sbjct 51548 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 51607 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| || ||||| |||||||||||| || || || || ||||| || || Sbjct 51608 GACACAATTGACAACGTAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCAG 51667 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || || || || |||||| | || ||| |||| || | || || || Sbjct 51668 CAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAAC 51727 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| | || | || || || |||||||| Sbjct 51728 ATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGGTAT 51777 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || |||| ||||| || || || |||| ||||| | Sbjct 51950 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 52009 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| || ||||| |||||||||||| || || || || ||||| || || Sbjct 52010 GACACAATTGACAACGTAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCAG 52069 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || || || || |||||| | || ||| |||| || | || || || Sbjct 52070 CAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAAC 52129 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| | || | || || || |||||||| Sbjct 52130 ATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGGTAT 52179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755423128220800