Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq3158 109 6e-19
seq3102 95.1 1e-14
>seq3158
Length=82937
Score = 109 bits (120), Expect = 6e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
||| |||||||||| ||||| ||||| ||||| |||||||| | || || || | ||
Sbjct 52390 CAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGAAAGCGTACGGCCATC 52331
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| || ||||| ||||| || ||||||||||| || || | || | | || |||
Sbjct 52330 TTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGAATAC-CTTCTTTAT 52272
Query 43091 CATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149
| ||| | ||||| | | || | | | || || |||||| || || | ||| ||||
Sbjct 52271 CTTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGACTTCTAACGTAATGG 52212
Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| ||||| || ||||| || ||||| |||||
Sbjct 52211 TTTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178
Score = 93.3 bits (102), Expect = 5e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039
||| | |||| || |||||||| ||||| |||| || ||||| | || || || ||
Sbjct 51751 ATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCAAGTTG 51692
Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
|| || ||||| || | ||||||||||| | || | | |||||||| | ||| |||
Sbjct 51691 TTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTGAATTT 51633
Query 43100 TTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158
| |||| ||| | | | |||||| ||||| || || | |||||| || ||||| |
Sbjct 51632 TCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGCCGG 51573
Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || || || || |||||
Sbjct 51572 TTAAGGTTTTCACGAAAATCTGCAT 51548
Score = 93.3 bits (102), Expect = 5e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039
||| | |||| || |||||||| ||||| |||| || ||||| | || || || ||
Sbjct 52153 ATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCAAGTTG 52094
Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
|| || ||||| || | ||||||||||| | || | | |||||||| | ||| |||
Sbjct 52093 TTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTGAATTT 52035
Query 43100 TTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 43158
| |||| ||| | | | |||||| ||||| || || | |||||| || ||||| |
Sbjct 52034 TCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTTGCCGG 51975
Query 43159 TTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || || || || |||||
Sbjct 51974 TTAAGGTTTTCACGAAAATCTGCAT 51950
>seq3102
Length=369104
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
||||||| || || ||||| || ||| || |||| || |||||||| || || || |
Sbjct 110034 CCTTTTGGATGTTATAATCGCTCAAAGTACGACCGTCTTCGAGCTGCTTTCCGGCAAAAA 110093
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| | |||||||||||| | || | || |||||| ||| ||| || ||| | |
Sbjct 110094 TCAATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATCTTGCTTTTCACATTGT 110153
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | ||||||||||| || || || | |||||||| ||||| || || ||||| || |
Sbjct 110154 CGATTGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 110213
Query 43174 AG 43175
||
Sbjct 110214 AG 110215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571792718786680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |