Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq1148 118 4e-22 >seq1148 Length=21331 Score = 118 bits (130), Expect = 4e-22 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 48914 TGAAGCTGTTGGCCAGGGAGATCGGATGCCCGGTGCTCCCGCTCTGCCAGCTCAACCGCG 48973 ||||| | |||||| ||| | || ||||||||| || |||| | ||||| |||| Sbjct 12002 TGAAGGCGCTGGCCAAGGAACTGGGCTGCCCGGTGATCGCGCTGTCGCAGCTGTCACGCG 11943 Query 48974 GATGTGAGTCTCGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGAGTCCGGCGCCA 49033 | ||||| ||| | || ||||||||| || | |||||||| ||||| || ||||||| Sbjct 11942 GCGTGGAGTCGCGCACCGACAAGCGCCCGATGATGAGCGACCTGCGCGAATCGGGCGCCA 11883 Query 49034 TCGAGCAAGACGCGGACATCGTGATGTTCGTGTACCGCGATGA 49076 ||||||| ||||| ||| || | |||||| | |||||||| || Sbjct 11882 TCGAGCAGGACGCCGACGTCATCATGTTCATCTACCGCGACGA 11840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180434141108136