Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3224 165 7e-36 seq2399 125 6e-24 seq3158 111 1e-19 seq3102 89.7 5e-13 >seq3224 Length=193136 Score = 165 bits (182), Expect = 7e-36 Identities = 420/637 (66%), Gaps = 4/637 (1%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| ||| |||| || | ||| || |||| ||||| ||| || || ||||| | | Sbjct 110166 TCAACCCGTTTCATGAACAAATCGGGAGTCCAAAGAGCAAGGAAAAGATCACGGGCTCTC 110107 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || ||||| || ||| |||||| | ||||| ||| || || | || | ||||| Sbjct 110106 ACTTCCTCCTTTCCGTGGTTCTTACGAAGATCCAGAAACTCGAAAATATCGGAGTGCCAA 110047 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 || || || || | ||| || || || || | ||||||||| || ||||||||||| || Sbjct 110046 GGTTCAAGATAGATGGCGAAGGCACCTGGCCGCTTATTGCCACCTTGATCGACGTATCGA 109987 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG--C 23579 || |||||||| | || | ||||| || |||| || ||||| | || | | || | Sbjct 109986 GCGGTGTTGTTAAAGACACGAAGCATAGGAACGATCCCATTGGAGGAGC--CATTCGTTC 109929 Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639 | || | ||||| | || || | ||||| | | ||| || || || | | Sbjct 109928 CTGCAATGTAGGAACCAGTCGCACGGATACGATGAACATTAAGACCAATACCACCAGCTG 109869 Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 ||| || |||| || || ||| || || || || || || |||||||| || || | Sbjct 109868 TTTTGGAAATCAGGGCACAGGTTTTGAGGGTATCATAAATACCGTCGATGCTATCTTCCT 109809 Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759 | | | | | |||||| |||| ||| || | | ||||| | || ||| || | Sbjct 109808 TCATATCAATGAGGAAACAGGAAGCCATCTGTGGCTGTGGCGTCCCCGCATTGAAAAGAG 109749 Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819 | || || || || || || | ||||| | ||| || || || || | | Sbjct 109748 TGGGAGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTCTCCATCGTTTTCT 109689 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 | || ||||| ||||| || || | ||| || ||||| ||||||| ||| || | ||| Sbjct 109688 CGATATCCTCGCCGTGAATGCCAACGGCAACACGCATGATCATGTGTTGGGGCCGCTCAG 109629 Query 23880 CCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGT 23939 | ||| || ||| | ||||||||| | | || || || || || ||||| | Sbjct 109628 CAACTTTGCCATTGATTCGCAGCAGATATGACCTCTCCAGTGTCTTGAACCCGAAATATT 109569 Query 23940 CATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 ||||| || |||||||||| || || ||||| || Sbjct 109568 GGTAGTTGAAATCACGATCGTAAACGATAGCCGAGTT 109532 Score = 150 bits (166), Expect = 2e-31 Identities = 434/652 (67%), Gaps = 33/652 (5%) Strand=Plus/Minus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 || |||||||| |||||||||||||||||||||| ||||| || ||| || || Sbjct 111418 GTACGAAGATAGTACATGCCCGTCTTCAGACCCAGTTTCCATCCGGCAAAGTGCATGCTT 111359 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATG---TACACATTGAACGACTGACTCTGATCG 22261 || | ||| || | | ||| ||| || | | |||| ||||||| ||| || Sbjct 111358 GTGATTTTGCCCATAGTAGGC---TCCTTGAGATGAATGTTGAGCGACTGAGACTGGTCA 111302 Query 22262 ATAAACGCTCCTCGATCGGCGGCCATATTTATCAAT-GTACGCATCGACATTTCCCATAC 22320 || || || ||||| || || ||||| || | | || || | || ||||||||||| Sbjct 111301 ATGAATGCGCCTCGGTCAGCAGCCAT-TTGAACGATAGTCCTTTGGGAAATTTCCCATAC 111243 Query 22321 GGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGT 22379 |||||||| || | || ||| || || | || || | | || || || ||| Sbjct 111242 TGTCTTGTAAAGAGCTTTAATGTCTGCGGGGAT-GTTTGGAATGTTTTGAACTGAACCGC 111184 Query 22380 TATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTT 22439 | |||||| || || || | ||| ||| | |||| | || | ||| | Sbjct 111183 CGTCAGCTATGATACGGTTCTTCATGTTGTCGGACCAGAGGCCGAGGTCGACAAGATCCT 111124 Query 22440 TGACCAGATGAC---GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAA 22496 | |||| | | |||| || | ||| || || || | | ||| || || || | Sbjct 111123 T---CAGAAGCCACGGGTTGACAATTTGGAATTCACCCGCAAGGACTCGCCGAGAATAGA 111067 Query 22497 TGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGG 22556 |||| || ||| | ||||| ||| |||| ||| ||| || |||||| || ||| | Sbjct 111066 TGTTTGACGTGTATGGTTCAAAACATTCGTTGAATCCGAGAATCTGACTTGTGCTAGCAG 111007 Query 22557 TCGGCATCGGCGCCAACAGTAGCGAG---TTTCTCAAGCCGTGCTTTGAAATTTTACTCT 22613 ||||||| || || |||| ||| || || | || ||||||||||| ||| | | | Sbjct 111006 TCGGCATGGGGGC-AACA--AGCAAGCTGTTGCGCACGCCGTGCTTTGCAATCTCCTTTT 110950 Query 22614 TGAGC--ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTG 22671 ||||| ||| ||| ||||| || || || ||||| || ||||||||| || || Sbjct 110949 TGAGCGAATC--CCAATCCCAAAGGTCACTAGGTGTCACTTT---CCACATATCATACTG 110895 Query 22672 CAACACGCC--GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCG 22729 ||| || || |||| || ||| |||||||||||| ||||| ||||| | | | | Sbjct 110894 CAAAACACCCTGCGAAACG--GGGGAGCCTTCGTACGTCTCGTAAGGACCCTCGACCTTG 110837 Query 22730 GCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTT 22781 || | ||||| ||| ||||||||||| ||| || || ||||| |||| Sbjct 110836 GCTATGTCGCAAGACGCGGTCAACGCGCCGTGATAAATTGTTTCGAAAATTT 110785 >seq2399 Length=446898 Score = 125 bits (138), Expect = 6e-24 Identities = 232/338 (69%), Gaps = 2/338 (1%) Strand=Plus/Minus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 |||| ||||| || |||| | || || || |||||||| ||||| ||||| ||| Sbjct 271675 CCACTTTCGCTCAGCGGCTGGTTGCCTTTGCGGCCGTCGAGGGTATTTTCTTCAGTGGCT 271616 Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077 || || | || || ||| | ||||| || || || ||||| ||||| || || | Sbjct 271615 CGTTCGCTTCCATTTTCTGGTTAAAGAAGCGTGGTCTTATGCCTGGCCTTACCTTCTCGA 271556 Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137 | || |||| || || |||||||||||||| || || ||||| || || | | |||| Sbjct 271555 ATGAACTGATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTTTCTC 271496 Query 58138 A-CATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCG 58196 | | | |||| | | | || | | || || ||| ||||||||||| || | | Sbjct 271495 ATCTTCGTCACCGCCCAGGCCCGCCGGC-CGTCCAGGCCATCATCACCGAGGCAGTTGAG 271437 Query 58197 ATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGAT 58256 ||||| || || || | || || |||||||| ||| | || || ||||| | | Sbjct 271436 ATCGAGAAAGAATTCTTGACGGATGCCCTACCTTGCGCCCTACTTGGAATGAATTCTAAG 271377 Query 58257 TTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACT 58294 | |||| ||||||||||||| ||||| |||||||| Sbjct 271376 CTCATGTGCCAGTACATTGAGTTCGTTGCTGACAGACT 271339 >seq3158 Length=82937 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || || | || ||||| |||||||| | || |||||| | ||| Sbjct 51548 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 51607 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| || ||| |||||||| || | || || |||||| Sbjct 51608 GACACAATTGACAACGTAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCAG 51667 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| |||||||| | ||||| | ||| | || || ||| Sbjct 51668 CAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAAC 51727 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || || ||||| || ||| | || | || |||| Sbjct 51728 ATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGGTA 51776 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || || | || ||||| |||||||| | || |||||| | ||| Sbjct 51950 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 52009 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| || ||| |||||||| || | || || |||||| Sbjct 52010 GACACAATTGACAACGTAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCAG 52069 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| |||||||| | ||||| | ||| | || || ||| Sbjct 52070 CAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAAC 52129 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || || ||||| || ||| | || | || |||| Sbjct 52130 ATTCAAAAAGAATCCACACTACATCTTGTCCTTCGGTTGCGTGGTGGTA 52178 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| ||||||| || || ||||| |||| || || | Sbjct 51015 CATGCAGATTTTCGTCAAGACCTTGACAGGAAAGACCATCACTCTCGAGGTGGAGTCTAG 51074 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||| | | |||| | || || || ||| | ||| ||||| ||| | || || |||| Sbjct 51075 CGATACTATCGACAATGTTAAGACCAAGA-TCCAGGATAAGGAGGGCATTCCTCCAGACC 51133 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||| || | || || |||||||| ||| | || ||| || || ||| |||| Sbjct 51134 AGCAACGCTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTGTCCGACTATA 51193 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||||| || || || |||| ||| | || | ||||||| Sbjct 51194 ACATTCAAAAAGAATCCACCCTCCACTTGGTTCTTCGCCTCCGTGGCGGTA 51244 Score = 102 bits (112), Expect = 7e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| |||||||| || || |||||| | || ||||| | || || | ||| Sbjct 51330 TCGTCAAGACCCTGACAGGAAAGACCATCACCCTAGAGGTTGAGTCTTCTGATACCATCG 51389 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || ||| | || ||| ||||| ||| | || || |||||||| ||| | | Sbjct 51390 ATAATGTGAAAACCAAGATTCAGGATAAGGAGGGCATTCCTCCAGACCAGCAACGTTTGA 51449 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||||||||| ||| | || ||| ||| | ||||||||||| || |||| Sbjct 51450 TCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCGGATTATAACATCCAGAAAG 51509 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| |||||||| || || ||| | || | || |||| Sbjct 51510 AATCAACTCTTCACCTTGTCCTTCGTCTTCGCGGTGGTA 51548 >seq3102 Length=369104 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| | || || || || ||||| || Sbjct 110214 TTCGTCAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGACACAATC 110155 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | || ||| | || ||| ||||| ||| | || || ||||||||||| | Sbjct 110154 GACAATGTGAAAAGCAAGATCCAGGATAAGGAGGGCATCCCACCGGACCAGCAGCGATTG 110095 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || || || || ||| | |||||| | ||| |||||||||||||||| ||||| Sbjct 110094 ATTTTTGCCGGAAAGCAGCTCGAAGACGGTCGTACTTTGAGCGATTATAACATCCAAAA 110036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445747003589520