Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq3355 111 1e-19 >seq3355 Length=30814 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 21003 TGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCC 21062 || ||||||| | ||| || || ||||||||||||||||| ||||| || || ||| Sbjct 8640 TGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGAAG 8699 Query 21063 ATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGA 21122 |||||||| | ||||||||||||||| ||||||| || || ||||| ||||| Sbjct 8700 ATGTCGGCACTGCGCTGGTACAGCTGGCACGACAGCTTGCCGTCCGCGACGTAGAACTGG 8759 Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCAC 21182 | || |||| || || | || |||||| || || |||||| |||||| |||| Sbjct 8760 AAGAACGCGTGGCAGGGCGCCAGCGCCATCTTCGGGATGTCCGCCACGTTCCAGGCGCTG 8819 Query 21183 ATAACGATGCGCCG 21196 | | |||||| || Sbjct 8820 ACGATGATGCGGCG 8833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427757851736880