Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3224 266 5e-66 seq2399 91.5 2e-13 >seq3224 Length=193136 Score = 266 bits (294), Expect = 5e-66 Identities = 597/895 (67%), Gaps = 4/895 (0%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| || || | |||||| | || || || || | |||||| | ||| | | Sbjct 110241 TCAAACTCATCACCGTAGACATCGGCCAACCCTGGCGCCTCATTAGGACAGAACAATGTC 110182 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | | || || |||||||| || | ||| ||| |||||||||| | || Sbjct 110181 CATTCACCGTTCTGCTCAACCCGTTTCATGAACAAATCGGGAGTCCAAAGAGCAAGGAAA 110122 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | || ||| ||||| ||||| ||||| |||||| || ||| | | | Sbjct 110121 AGATCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTACGAAGATCCAGAAACTCGAAA 110062 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 ||||| || ||||| ||||| | || ||||| | | || || || || || || || Sbjct 110061 ATATCGGAGTGCCAAGGTTCAAGATAGATGGCGAAGGCACCTGGCCGCTTATTGCCACCT 110002 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | ||||| ||||||||| ||| | || | | ||| |||| || |||||||| Sbjct 110001 TGATCGACGTATCGAGCGGTGTTGTTAAAGACACGAAGCATAGGAACGATCCCATTGGAG 109942 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 | ||||| || || | || ||| ||| | ||||| ||| | || ||||| Sbjct 109941 GAGCCATTCGTTCCTGCAATGTAGGAACCAGTCGCACGGATACGATGAACATTAAGACCA 109882 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280 || || || || |||| || || | || || ||| | |||||||| || || || Sbjct 109881 ATACCACCAGCTGTTTTGGAAATCAGGGCACAGGTTTTGAGGGTATCATAAATACCGTCG 109822 Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340 |||||||| || |||| | || || |||||| || ||| || | | || ||| Sbjct 109821 ATGCTATCTTCCTTCATATCAATGAGGAAACAGGAAGCCATCTGTGGCTGTGGCGTCCCC 109762 Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400 ||||| || | || |||||||| || || || |||| | |||| | ||| || ||| Sbjct 109761 GCATTGAAAAGAGTGGGAGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 109702 Query 80401 TCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGC 80460 || || | | || |||||| ||||| || || || |||||||| | |||||| Sbjct 109701 TCCATCGTTTTCTCGATATCCTCGCCGTGAATGCCAACGGCAACACGCATGATCATGTGT 109642 Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520 || || | ||| | | ||| ||| ||| || || || || | |||| || || Sbjct 109641 TGGGGCCGCTCAGCAACTTTGCCATTGATTCGCAGCAGATATGACCTCTCCAGTGTCTTG 109582 Query 80521 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT 80578 || || ||||| | ||| ||||| || || ||||||| ||| |||||||||||| | Sbjct 109581 AACCCGAAATATTGGTAGTTGAAA--TCACGATCGTAAACGATAGCCGAGTTGAGTTCCT 109524 Query 80579 CCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCAT 80638 | || ||| |||| | || ||| | || || || || | | | | Sbjct 109523 CAGCATGTTTCATAACAATTTCGTAGGTCTTTTGGGAGATCATAGGTGCAGGGCGGTTGT 109464 Query 80639 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 80698 | || || || ||| ||| | | | ||| || || ||| |||| ||||||| || | Sbjct 109463 TCTTTGGGTTGACAAAGTGGTAAAGATCGTCAATAACTGACGAAAATTGTTTTTTGGTCT 109404 Query 80699 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||||| | |||||||| |||||||| || || | ||| ||||| |||||||| Sbjct 109403 GTTTGTGCAAGTTTGATACAGCTATTCTAGCAGCAAGAATAGCATAGTCTGGATG 109349 Score = 136 bits (150), Expect = 6e-27 Identities = 699/1098 (64%), Gaps = 25/1098 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| |||||||| || || || | ||||||| ||||||||||| ||||| || ||| Sbjct 111448 GTGAACTGAATGGGTGCAGAGGCTGCCATCGTACGAAGATAGTACATGCCCGTCTTCAGA 111389 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || || |||||||| || ||||| || || | |||| | | || || | | Sbjct 111388 CCCAGTTTCCATCCGGCAAAGTGCATGCTTGTGATTTTGCCCATAGTAGGCTCCTTGAGA 111329 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || || || | || ||| || || ||||| || || | ||| |||||||||| | | Sbjct 111328 TGAATGTTGAGCGACTGAGACTGGTCAATGAATGCGCCTCGGTCAGCAGCCATTTGAACG 111269 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || ||| |||| | ||||||||| | || || |||| ||||| ||| | || | | Sbjct 111268 ATAGTCCTTTGGGAAATTTCCCATACTGTCTTGTAAAGAGCTTTAATGTCTGCGGGGATG 111209 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 |||| | || |||| || || || || || || || | ||||| || | || | Sbjct 111208 TTTGGAATGTTTTGAACTGAACCGCCGTCAGCTATGATACGGTTCTTCATGTTGTCGGAC 111149 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | ||| | | | | || || ||| || || | ||| ||||| || Sbjct 111148 CAGAGGCCGAGGTCGACAAGATCCTTCAGAAGCCACGGGTTGACAATTTGGAATTCACCC 111089 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | |||| ||||| || || || || |||||||| | |||| || ||| Sbjct 111088 GCAAGGACTCGCCGAGAATAGATGTTTGACGTGTATGGTTCAAAACATTCGTTGAATCCG 111029 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | ||| ||| || || || ||||| || || || | || || || | | ||| Sbjct 111028 AGAATCTGACTTGTGCTAGCAGTCGGCATGGGGGCAACAAGCAAGCTGTTGCGCACGCCG 110969 Query 79195 TATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 || | || || | | ||| || || |||||||||||||| ||| || || | Sbjct 110968 --TGCTTTGCAATCTCCTTTTTGAGCGAATCCCAATCCCAAAGGTCACTAGGTGTCACTT 110911 Query 79253 TCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAG 79312 |||| | |||||| || | || ||| | | || || ||| ||| || || |||| Sbjct 110910 TCCACATATCATACTGCAAAACACCCTGCGAAACGGGGGAGCCTTCGTACGTCTCGTAAG 110851 Query 79313 GTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 | || || | ||||| || ||| ||| || || |||| |||||| ||||||| Sbjct 110850 GACCCTCGACCTTGGCTATGTCGCAAGACGCGGTCAACGCGCCGTGATAAATTGTTTCGA 110791 Query 79373 AAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTA-TCAAATGGATAATTTAAGAGAAT 79430 |||| | |||| | | |||| || || ||| | ||||| || | || || Sbjct 110790 AAATTTGTATATTCAACTGCTTG-GCCTC-GGGCGAGTCAAACGGCAAGCGCAAAGCAAG 110733 Query 79431 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAAT 79490 || || || || | ||||| ||||| | | || || | ||| | ||| | | Sbjct 110732 GAAAGCATCGGCAAGCCCTTGCACACCGACCGCAATTGGACGATGGCGGAAATT--ACTT 110675 Query 79491 TTC--AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACT 79548 ||| ||| || |||| |||||||| || ||| || || || || | ||| | || Sbjct 110674 TTCCGAGCCTCAGGAACAGGATAATGGTTGCCATCAATTATCTTGTTCAAATTGCGAACA 110615 Query 79549 ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCA-AATCGTCCATCTATTA----CAA 79603 | |||| || || | | ||| ||| ||| | ||| ||| | | | ||| Sbjct 110614 AGAACTTGCGTAACTTCATGCAATTTACCAAAGTCATACTCG-CCA-CGAACAGGATCAA 110557 Query 79604 -ACATGT--TCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 79660 | |||| ||| || | ||||| || || ||||| || || |||| | | | || Sbjct 110556 CATATGTGGGCAAGGCAAGGGATGCTAGGTTGCAAACAGCAACTTCATCTGGTGCGGTAT 110497 Query 79661 ATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTAC 79720 | | || || || || || | |||| | ||| ||||| | ||||| || || | Sbjct 110496 ACTCGATGATCTCCGTACACAAGTTAGAGCTTCGAATCGTTCCGAGATTTTTCTGGTTGC 110437 Query 79721 TCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATT 79780 ||||| || || || ||||| ||||| ||||| ||| | || || || |||||| || Sbjct 110436 TCTTTCGATTGCATGCGTCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTCTGAGCTT 110377 Query 79781 CTATAATCGCTTTCCAGA 79798 | | || || | ||||| Sbjct 110376 CCAGGATGGCGTACCAGA 110359 >seq2399 Length=446898 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || ||| ||| ||||||||||| | | || ||||| || || || || || Sbjct 271509 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATCAGTTCATTCGAGAAGGTAAG 271568 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| || |||||||| || | ||| || ||||| || || || ||| ||||| Sbjct 271569 GCCAGGCATAAGACCACGCTTCTTTAACCAGAAAATGGAAGCGAACGAGCCACTGAAGAA 271628 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || || || || || ||||||||||| || Sbjct 271629 AATACCCTCGACGGCCGCAAAGGCAACCAG 271658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718237546328840