Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3224 131 2e-25 >seq3224 Length=193136 Score = 131 bits (144), Expect = 2e-25 Identities = 206/292 (71%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||||| || | || ||||||||||| | || || || ||||||| ||||||||||| Sbjct 111461 TTCCTGATCGACAGTGAACTGAATGGGTGCAGAGGCTGCCATCGTACGAAGATAGTACAT 111402 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGC 70906 ||| || || ||||| || |||||||| ||| ||||| || || | |||| |||| Sbjct 111401 GCCCGTCTTCAGACCCAGTTTCCATCCGGCAAAGTGCATGCTTGTGATTTTGCCCATAG- 111343 Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966 |||| || | ||||| || | ||||||| || || ||||| || || | ||| | Sbjct 111342 TAGGCTCCTTGAGATGAATGTTGAGCGACTGAGACTGGTCAATGAATGCGCCTCGGTCAG 111283 Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026 ||||||||| | ||| ||| |||| | ||||||||| | || || |||| |||| Sbjct 111282 CAGCCATTTGAACGATAGTCCTTTGGGAAATTTCCCATACTGTCTTGTAAAGAGCTTTAA 111223 Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075 | ||| | || | ||||| | || |||| || || || || || || || Sbjct 111222 TGTCTGCGGGGATGTTTGGAATGTTTTGAACTGAACCGCCGTCAGCTATGAT 111171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671109997055560