Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2399 125 1e-23 >seq2399 Length=446898 Score = 125 bits (138), Expect = 1e-23 Identities = 198/281 (70%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| ||||| | || ||||| ||||| | |||||| |||| || Sbjct 272135 ATTTGGCAAATGTACAAGAAGGCCGAAGCATCCTTCTGGACTGCTGAAGAGATCGACTTG 272076 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | || | | || ||| || | || || || Sbjct 272075 TCCAAGGATCTCCACGACTGGAATCAGCGACTCAACGATGATGAACGCTACTTCATCTCA 272016 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 ||| | ||||||||||| |||| ||||||||||||||| || || || | ||| || || Sbjct 272015 CACGTCTTGGCCTTCTTCGCCGCCTCCGATGGAATCGTGAATGAAAACCTTGTCGA-GCG 271957 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| | ||| | || ||||| | ||||| ||||| ||||| || ||||| Sbjct 271956 CTTCAGTGGTGAGATCCAGATCCCAGAAGCCCGTTGCTTCTACGGGTTCCAGATTATGAT 271897 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 |||||| | ||||| || | |||||| || || |||| Sbjct 271896 GGAGAACATCCACTCTGAGACCTACTCTCTCCTCATCGACA 271856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741026954661560