Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq3158 109 4e-19 >seq3158 Length=82937 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | |||||| ||||| ||||| || ||| || || || |||||||||||| Sbjct 52404 CCACCACGCAATCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGAA 52345 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| | ||| || ||||| | || | || ||||| || |||| Sbjct 52344 AGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGA 52285 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || ||| || |||| || | || |||||||| ||| || Sbjct 52284 ATACCTTCTTTATCTTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGACT 52225 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| ||||||||||| || ||||| || || || || || |||||| Sbjct 52224 TCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCATA 52177 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || ||||| || ||||| ||||| ||| | | |||| || | || Sbjct 51522 TGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTGCGGCCGTCCTCAAGCTGC 51463 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||||||| | ||||||||||| ||||| ||||| || || || || ||| ||| Sbjct 51462 TTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGAATCTTG 51403 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 | || ||| | || |||||||| | || || |||| ||| ||||| || |||||| Sbjct 51402 GTTTTCACATTATCGATGGTATCAGAAGACTCAACCTCTAGGGTGATGGTCTTTCCTGTC 51343 Query 15341 AGAGTTTTTAC 15351 || || || || Sbjct 51342 AGGGTCTTGAC 51332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362163834660621