Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq1229 93.3 5e-14 >seq1229 Length=13524 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997 ||||| || || |||||||| | ||| | ||| | | | || || || ||||| Sbjct 3087 CCGTGGGTCAGGTGGCCGCCTTCGGCCAGGCTCATGCCCATGATCGTGTCGCCGGGCTTG 3028 Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057 |||| || || | || |||| ||| || || | |||||||| || || ||||| ||| Sbjct 3027 AGGAACGCGAGGAACACGGCCTCGTTGGCCTGGGCGCCGGAATGCGGCTGGACGTTCGCG 2968 Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCT 7117 || | | ||||| | || | || || || |||| | |||| | ||| | Sbjct 2967 GCATCGGCCCCGAACAGCTGCTTGACCCGGTCGATGGCCAACTGCTCGGCGACGTCGACG 2908 Query 7118 TTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGT 7173 | | |||||||||| || || |||||||| ||||| ||||| || ||||||||||| Sbjct 2907 TGTTCGCAGCCGCCGTAGTAGCGTTTGCCGGGATAGCCCTCGGCGTACTTGTTGGT 2852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555339034758760