Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq1247 82.4 3e-11 >seq1247 Length=8953 Score = 82.4 bits (90), Expect = 3e-11 Identities = 213/319 (67%), Gaps = 17/319 (5%) Strand=Plus/Plus Query 10139 AATGGCA---AGCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGT 10195 ||||||| ||||| |||||||| ||| | || || || | ||| |||||| ||| Sbjct 8234 AATGGCAGGCAGCGTTAACAAGGTTATTCTCGTCGGCAATCTCGGGCGCGATCCCGAATC 8293 Query 10196 CCGTTACCTGCCGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATA 10255 || | | | || ||||| | ||| | |||| | || ||||||| | ||| | | Sbjct 8294 GCGCTCGTTCCAGAACGGCGGCAAGGTGGTGAACCTGCGCATCGCGACCAGCGAAAGCTG 8353 Query 10256 CAAGGA---CAAGGCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTT 10312 ||||| ||| || ||||| |||||| || |||||||| ||| || | Sbjct 8354 GAAGGATCGCAATTCG---GGCGAGCGCAAGGAAAAAACCGAATGGCATTCGGTCGCGAT 8410 Query 10313 CTTCG--GTCGGCTGGCTGAGATCGTCGACGAGCAC---CTGCGCAAGGGCGCATCTGTC 10367 |||| | |||| | | || ||| | ||||| | || |||||||| | ||| Sbjct 8411 CTTCAACGAAGGCTTG--GCGAACGTGGCCGAGCGCTTCCTACGCAAGGGGTCGAAGGTC 8468 Query 10368 TACATCGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTAC 10427 || |||||||| | | |||| || || ||||||||||| |||||||| || || Sbjct 8469 TATATCGAGGGCCAGCTGCAGACCCGCAAATGGCAGGATCAGAATGGCCAGGACCGCTAT 8528 Query 10428 ACGACCGAGATCGTCGCTG 10446 |||||||| |||| |||| Sbjct 8529 TCGACCGAGGTCGT-GCTG 8546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204288932738163