Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3158 131 4e-25 >seq3158 Length=82937 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 ||| |||||||| || || || || || || | || ||||| ||||| ||||||||||| Sbjct 52369 TTCCTTCTGAATGTTGTAATCGGAAAGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAA 52310 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 || || | ||||||||| || || || ||||||||||| |||||||||| || || || Sbjct 52309 GATGAGTCGCTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATCTTTGTCTTAACGTT 52250 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | |||||| | ||| || |||| ||||| || || || || || || || || Sbjct 52249 ATCAATGGTATCTGACGATTCGACTTCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCAC 52190 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 52189 GAAGATCTGCAT 52178 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||||||||| || ||||| || || ||||| | ||||| Sbjct 51532 AAGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAAAGAGTGCGGCCGTC 51473 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||| || || | | || || || ||||| || || || ||||| Sbjct 51472 CTCAAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGAATGCCCTCCTTATC 51413 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | ||| ||||| || | |||||| || || |||||||| || || || Sbjct 51412 CTGAATCTTGGTTTTCACATTATCGATGGTATCAGAAGACTCAACCTCTAGGGTGATGGT 51353 Query 104527 CTTACCAGTAAGTGTTTTTAC 104547 ||| || || || || || || Sbjct 51352 CTTTCCTGTCAGGGTCTTGAC 51332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151347047271548