Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_005345.2 Length=49220 Score E Sequences producing significant alignments: (Bits) Value seq1598 158 4e-34 >seq1598 Length=2665 Score = 158 bits (174), Expect = 4e-34 Identities = 242/342 (71%), Gaps = 5/342 (1%) Strand=Plus/Minus Query 46571 GGTACCGCGTTCGGCCCCGACTCCGTCCGCGCGCATGAGGTATCCCTCGCCGTCAGCCTC 46630 || || ||||||||||| || ||| | || ||||| ||||| |||||||||||||||||| Sbjct 1847 GGCACGGCGTTCGGCCCGGAGTCCCTGCGTGCGCACGAGGTCTCCCTCGCCGTCAGCCTC 1788 Query 46631 GGCCCCGAGCACGTCGACCGGGCACTCGCCGTCGCCACCGCGTGGAAACCC-CCCACGTC 46689 || ||| || ||| |||||| || | ||||||| || |||||| ||| | || | Sbjct 1787 GGAGGCGACCAAATCGGCCGGGCCCTGGACGTCGCCCGCGAGTGGAAGCCCAGCGACAGC 1728 Query 46690 GATGCCAGCGGAACGGCGCAGCGGCGTGTACATCGAGCTCGCTCGCGCGCAGGACTGGGC 46749 | || || || || || |||| | |||||||||||||| ||||| ||| ||||| Sbjct 1727 -CTCCCCGCCGAGCGCCGGTCCGGCTTCTACATCGAGCTCGCGCGCGCCCAGCTGTGGGC 1669 Query 46750 AGGCCTACACCGGGACGCGTTCGAGAGTCTCCGAGTGGCACGCGCTGCAGCACCCCAGCA 46809 || || | ||||||||||||| || ||||| ||| | || || | || Sbjct 1668 GGGGCTGCCGACGGACGCGTTCGAGTCGCTGTCTGTGGCCCGCCACGTTGCTCCACTTCA 1609 Query 46810 CACCCGCGAACACCCTTGGGCCCGCGAGGTCGCGACCGGGCTGCGCCGCCAAGCACGCTC 46869 ||| || |||||||| ||||| || | ||| || ||||| ||| | || || Sbjct 1608 CACTCGGGAACACCCATGGGCGAAGGAAGACGCCCGCGCGCTGCTCCGACTTCAGCGGTC 1549 Query 46870 GGACGCCGAGTCGTTGACGCACTTCGCCGAGTGGATCGGCGC 46911 | ||||| || | |||| ||||||||||||||||| || Sbjct 1548 G---ACCGAGGCGGTCACGCGGTTCGCCGAGTGGATCGGAGC 1510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157375894303404