Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03]
3,481 sequences; 36,718,296 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1375 102 1e-16
>seq1375
Length=57924
Score = 102 bits (112), Expect = 1e-16
Identities = 290/441 (66%), Gaps = 25/441 (6%)
Strand=Plus/Minus
Query 164510 AACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTC 164569
|||| | ||||| ||||| | | || || ||||| ||||||||||| || ||
Sbjct 5209 AACACGTTAAAGGCATTTTGCTTTACGGCCCCCCTGGAACGGGTAAAACATTGATCGCGA 5150
Query 164570 GATGCATTGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAA 164625
|| |||| | || | || ||| || || || ||| |||||||||||||||||
Sbjct 5149 GACAGATTGGTAAAA-TGTTGAAT-GCAAAGGAGCCA--AAAGTTGTTAATGGTCCTGAA 5094
Query 164626 TTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCT 164685
| | |||||||| || || | || |||| ||| |||||||| | ||| || |||
Sbjct 5093 GTTCTCAACAAATACGTCGGCCAATCCGAAGAGAATATTAGAAAGCTTTTTGCTGATGCT 5034
Query 164686 GAAGAAGAACAAAAGAAAGCAGGTTTA-GCTAGTAAATTACATGTTATTGTTTTTGATGA 164744
||| ||||| | ||| || ||| | | ||| | | ||| |||| |||| || ||
Sbjct 5033 GAAAAAGAATACAAG-GAGAAGGGAGAGGAAAGTGGACTTCATATTATCATTTTCGACGA 4975
Query 164745 GATAGATGCTCTTTGCA---AAAAACGT------------GGTGATAATATTATTCATGA 164789
|||||||| |||||| ||| | || |||| || | | | |||
Sbjct 4974 ATTAGATGCTGTTTGCAAGCAAAGAGGTAGTGGAGCTGGCGGTGGTACTGGTGTGGGTGA 4915
Query 164790 TGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTT 164849
|| || ||||| | | || ||| | |||||||| || | |||||||| ||
Sbjct 4914 CAGCGTTGTGAATCAACTTTTGTCGAAACTTGATGGTGTTGACCAACTGAATAATATCTT 4855
Query 164850 AATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCG 164909
| | | || |||||||||||| ||| | ||||| ||||| | |||||||| |||||
Sbjct 4854 ATTGATTGGAATGACCAACCGAATGGATATGATTGACGATGCCCTTTTACGACCAGGTCG 4795
Query 164910 ATTAGAATTGAAAATAGAAAT 164930
| ||| | | || |||||
Sbjct 4794 CCTGGAAGTACACATGGAAAT 4774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595846072119600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |