Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1375 102 1e-16 >seq1375 Length=57924 Score = 102 bits (112), Expect = 1e-16 Identities = 290/441 (66%), Gaps = 25/441 (6%) Strand=Plus/Minus Query 164510 AACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTC 164569 |||| | ||||| ||||| | | || || ||||| ||||||||||| || || Sbjct 5209 AACACGTTAAAGGCATTTTGCTTTACGGCCCCCCTGGAACGGGTAAAACATTGATCGCGA 5150 Query 164570 GATGCATTGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAA 164625 || |||| | || | || ||| || || || ||| ||||||||||||||||| Sbjct 5149 GACAGATTGGTAAAA-TGTTGAAT-GCAAAGGAGCCA--AAAGTTGTTAATGGTCCTGAA 5094 Query 164626 TTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCT 164685 | | |||||||| || || | || |||| ||| |||||||| | ||| || ||| Sbjct 5093 GTTCTCAACAAATACGTCGGCCAATCCGAAGAGAATATTAGAAAGCTTTTTGCTGATGCT 5034 Query 164686 GAAGAAGAACAAAAGAAAGCAGGTTTA-GCTAGTAAATTACATGTTATTGTTTTTGATGA 164744 ||| ||||| | ||| || ||| | | ||| | | ||| |||| |||| || || Sbjct 5033 GAAAAAGAATACAAG-GAGAAGGGAGAGGAAAGTGGACTTCATATTATCATTTTCGACGA 4975 Query 164745 GATAGATGCTCTTTGCA---AAAAACGT------------GGTGATAATATTATTCATGA 164789 |||||||| |||||| ||| | || |||| || | | | ||| Sbjct 4974 ATTAGATGCTGTTTGCAAGCAAAGAGGTAGTGGAGCTGGCGGTGGTACTGGTGTGGGTGA 4915 Query 164790 TGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTT 164849 || || ||||| | | || ||| | |||||||| || | |||||||| || Sbjct 4914 CAGCGTTGTGAATCAACTTTTGTCGAAACTTGATGGTGTTGACCAACTGAATAATATCTT 4855 Query 164850 AATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCG 164909 | | | || |||||||||||| ||| | ||||| ||||| | |||||||| ||||| Sbjct 4854 ATTGATTGGAATGACCAACCGAATGGATATGATTGACGATGCCCTTTTACGACCAGGTCG 4795 Query 164910 ATTAGAATTGAAAATAGAAAT 164930 | ||| | | || ||||| Sbjct 4794 CCTGGAAGTACACATGGAAAT 4774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595846072119600