Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3158 116 3e-21 >seq3158 Length=82937 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || | ||||| ||| ||||| |||| ||| |||||| || | ||| |||||| Sbjct 52404 CCACCACGCAATCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGAA 52345 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| || || || ||||| ||||||| | || || |||||||| ||| Sbjct 52344 AGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGA 52285 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||||||||| || | ||| |||| ||| ||| | | || || | ||||| Sbjct 52284 ATACCTTCTTTATCTTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGACT 52225 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||| ||||||||||| || || || ||||| ||||||||||| Sbjct 52224 TCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || ||||| ||||| | |||||| ||| || ||| | ||||| Sbjct 51224 ACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGACAGCGTGCGGCCGTCCTCG 51165 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| || | |||||| ||||||||||| || || || || | Sbjct 51164 AGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGG 51105 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTT 94977 || || | ||| || | ||| ||| || || | || || || | |||||||| || Sbjct 51104 ATCTTGGTCTTAACATTGTCGATAGTATC-GCTAGACTCCACCTCGAGAGTGATGGTCTT 51046 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || | || || || || ||||||||| Sbjct 51045 TCCTGTCAAGGTCTTGACGAAAATCTGCATG 51015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448271693729160