Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq523 98.7 2e-16 seq468 95.1 2e-15 >seq523 Length=147924 Score = 98.7 bits (108), Expect = 2e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || ||||||| || | |||| ||| | |||| |||||| | |||| |||| || | Sbjct 73704 TGATCTATGACGAAACTCGTACTGTCCTAAAGACTTTCCTCGAATCCGTCATCCGCGACG 73645 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || |||||||||||||| ||||||||||| ||||| | ||| | ||||||| Sbjct 73644 CAGTCACATACACCGAGCACGCTAAGCGTAAGACTGTTACCTCGCTCGATGTTGTCTATG 73585 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||||||| || || || | | || ||||| || ||||| Sbjct 73584 CCTTGAAACGACAGGGTCGCACTCTGTACGGTTTCGGTGGTTAA 73541 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || || || || |||| ||||| | || || ||||||||||| ||||||||||| ||||| Sbjct 73895 GCCAAACGCCACCGCAAGATCT-TGCGCGACAACATCCAAGGTATCACCAAGCCCGCTAT 73837 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||| ||||| ||||| || ||||||||| | |||| Sbjct 73836 TCGTCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATATCTG 73796 >seq468 Length=65293 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/99 (83%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| |||||| || ||||| |||||||| || ||||| ||||| Sbjct 1022 GCCAAGCGTCACAGAAAGAT-TCTTCGTGACAACATTCAAGGAATTACAAAGCCCGCTAT 964 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||| ||||| ||||| || ||||||||| |||| Sbjct 963 CCGTCGTCTTGCTCGCCGTGGCGGTGTCAAGCGTATCTC 925 Score = 87.8 bits (96), Expect = 3e-13 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || ||||||| |||| || ||| |||||| ||||||| | |||||| | |||| Sbjct 848 TGATCTATGACGAGACCCGAACTGTCCTGAAGACCTTCCTCGAAGGCGTTATTCGCGATG 789 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || || |||||||| || | |||||||| || || ||||| | || |||| Sbjct 788 CGGTCACATACACTGAGCACGCCAAGAGAAAGACTGTTACATCTTTGGATGTTGTTTATG 729 Query 16656 CATTGAAACGTCAAGGCCGTAAG 16678 | ||||||||||||| |||||| Sbjct 728 CTCTGAAACGTCAAGGACGTAAG 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072017297333