Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3158 95.1 1e-14 >seq3158 Length=82937 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || |||||| | ||||| | |||||||| | Sbjct 52178 ATGCAGATCTTCGTGAAGACCCTGACGGGAAAAACCATTACGTTAGAAGTCGAATCGTCA 52237 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||||| || |||||||| || || || |||||| Sbjct 52238 GATACCATTGATAACGTTAAGACAAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAA 52297 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | | || |||||||||||||||| | | | | |||||| ||| Sbjct 52298 CAGCGACTCATCTTTGCTGGAAAGCAACTCGAAGATGGCCGTACGCTTTCCGATTACAAC 52357 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || ||| || | ||||| || || |||||| | || || Sbjct 52358 ATTCAGAAGGAAAGCACTCTGCATTTGGTTTTGAGATTGCGTGGTGG 52404 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| ||||| || || |||| || | ||||| || || | Sbjct 51548 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 51607 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || ||| || ||| ||||| || || || || || || || Sbjct 51608 GACACAATTGACAACGTAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCAG 51667 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||| ||||| ||||||| | | || || || ||| Sbjct 51668 CAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAAC 51727 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 |||||||||||||| ||| | ||| Sbjct 51728 ATTCAAAAAGAATCCACACTACAT 51751 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| ||||| || || |||| || | ||||| || || | Sbjct 51950 ATGCAGATTTTCGTGAAAACCTTAACCGGCAAGACGATCACGTTAGAAGTTGAATCCTCC 52009 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || ||| || ||| ||||| || || || || || || || Sbjct 52010 GACACAATTGACAACGTAAAAACGAAAATTCAAGACAAGGAGGGAATTCCACCAGACCAG 52069 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||| ||||| ||||||| | | || || || ||| Sbjct 52070 CAGCGGTTGATCTTCGCCGGCAAACAACTTGAAGATGGTCGGACGCTCTCTGACTACAAC 52129 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 |||||||||||||| ||| | ||| Sbjct 52130 ATTCAAAAAGAATCCACACTACAT 52153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429917760099555