Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq2390 105 2e-18 seq159 80.6 8e-11 >seq2390 Length=802 Score = 105 bits (116), Expect = 2e-18 Identities = 167/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 39221 GCGGCGACCTTCATCGCGCGCATCGGCTCCGGATTCAGCAGGCCGCCGCCGACGCGCTTC 39280 ||||||| ||||||| | |||| ||| ||| || || ||| || |||||||| Sbjct 764 GCGGCGAACTTCATCACCTTGATCGCCTCGCTGTTCGACACGCAGCCACCCACGCGCTTG 705 Query 39281 GTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACGGATCGCGCAGCAC-GCGAACCCC 39339 || | |||||| ||| ||||||| ||||| ||||||||||| | ||| | | Sbjct 704 GTGGCGTAGAAGCTGACGAACGGCTTTTTGGTGTAGGGATCGCGCAGGATTGCGGTCTCA 645 Query 39340 GATGCGGTCGATGATCAGATACGTCTGCTGGAAGTCGCCGAAGAGAATCGGCGTCGAGTT 39399 | ||| ||| |||||||| | || ||||| ||| ||| |||| | || ||| Sbjct 644 GC-GCGCTCGGCAATCAGATATCCCGCCTTGAAGTTGCCAAAGGCGATCGACAGCGTGTT 586 Query 39400 CGCCGCCACATCCGGCATGTCCGGCACCTCGGTAACCGGATAGCCCGCCAGCGTCGC 39456 |||||||| || ||||||||| | ||||| ||||||||||| ||||||||| Sbjct 585 CGCCGCCATGTCGGGCATGTCCTCCGCCTCGACCACCGGATAGCCGAGCAGCGTCGC 529 >seq159 Length=45922 Score = 80.6 bits (88), Expect = 8e-11 Identities = 134/194 (69%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 23759 TGCAGTACGCACCGCTGCCGACGTTGTATGCGAAGCTCACGGCGGCCGCGAGCTGGTACG 23818 ||||||| || | |||||| |||||| || | | ||||| |||||| || | Sbjct 38703 TGCAGTAAGCGGTGGTGCCGATGTTGTAGGCCAGCGAGGCAGCGGCTGCGAGCGCGTTGG 38644 Query 23819 TGTGGCCCTTCAGGCTCGGCGTGCACTTCAGCACGGGCTCCGCGTGCTCGATCAGACGTT 23878 | | || ||||| | ||||||||||||| ||| ||||| || || ||||||| | Sbjct 38643 GGCGCCCGATCAGGTTGGGCGTGCACTTCACCACCGGCTCGGCATGGGCGATCAGCTGCC 38584 Query 23879 GCTCCAGGCGCGCGCGGCACTCATCCGGCGTGAAGCGCTGGCCGGCGCGCACGTCCTTCG 23938 |||| || ||||| ||||||| ||| || ||| || | |||||||| | Sbjct 38583 GCTCAAGACGCGCTTGGCACTCTTCCTTGGTCGCCACCTGCCCCGGCTTAACGTCCTTGG 38524 Query 23939 TGTCGCCATTGCAG 23952 ||||||| |||||| Sbjct 38523 TGTCGCCGTTGCAG 38510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143411671564596